Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06638 ATGGCGGCGATTGAGAGAGGTCTGGTGAACTCACGGTGTGGAGACGGTCCTGAAGATATCAGACCCAAGTTCGGCAGCGGCGACGTCTCCTCTGAACCCAAATCTCCTCCTCCTACCAAACTCATATGTCACCGACTTTGGGGTGCAAAACTTTGTCCTCGATGTATTACTAGTCATACTTGTGAACCTGAGTATAAACCTACAGTCAAGATTGGGAGTTTTCGCGTACCTGACTTTATGGAAGCTTTTGTGGAGAAGATGATTGGATCCTATCTTGACAACACTAATTCTGTTCTGGTAACCGACCTCCCGTGCTATGTCAGAAGTAACTCTGTTTTGACTGAATTCTGTTGTCCTTATGGAAGTGTGACCAGTGCCGATGTTGCTATTGATCAAGAGTCTGGCTATACTGGGTGCTTTGGCTTTGTTAGCTTTGCCACCAGGGACGATGCTCAGAATGCTATTAACAATCTCAATGGAGTTCAATGGCTCACCCCAAAAACAACCTCTAAGTATTAG 519 0.4586 MAAIERGLVNSRCGDGPEDIRPKFGSGDVSSEPKSPPPTKLICHRLWGAKLCPRCITSHTCEPEYKPTVKIGSFRVPDFMEAFVEKMIGSYLDNTNSVLVTDLPCYVRSNSVLTEFCCPYGSVTSADVAIDQESGYTGCFGFVSFATRDDAQNAINNLNGVQWLTPKTTSKY 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06638 172 SMART rrm1_1 97 167 IPR000504 GO:0003723
Mepo3g06638 172 MobiDBLite consensus disorder prediction 1 37 - -
Mepo3g06638 172 Gene3D - 91 171 IPR012677 -
Mepo3g06638 172 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 99 162 IPR000504 GO:0003723
Mepo3g06638 172 SUPERFAMILY RNA-binding domain, RBD 92 163 IPR035979 GO:0003676
Mepo3g06638 172 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 96 172 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06638 76 169 Eukaryotic Initiation Factors Gene Family AT3G11400 41.121 1.94e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06638 - - mnt:112093581 68.5514