Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06633 ATGAGTTCCGGCGAATTGGGCTGCATTTACGCCACCTTGATCCTCCACGACGATGGAATCCCAATCACCGCGGAGAAGATCGGCACTTTGTTGAAGGCTGCTAACGTCACCGTTGAATCCTACTGGCCAAGCCTATTCGCTAAGCTTGCTCAGAGCAAGAACGTTGATGATCTCGTTTTGAATTCCGGCGCTGTCGGTGGTGCCGCCGTTGCCGTATCTGCACCTTCTGCTGGTGGTGGAGCCGCTGCAGCTGCCGAACCTGCCGCCGTTGCAAAGAAGGAGGAAGCCAAGGAAGAAAGTGATGATGACATGGGCTTTAGTTTGTTTGACTAA 333 0.5345 MSSGELGCIYATLILHDDGIPITAEKIGTLLKAANVTVESYWPSLFAKLAQSKNVDDLVLNSGAVGGAAVAVSAPSAGGGAAAAAEPAAVAKKEEAKEESDDDMGFSLFD 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06633 110 Gene3D - 1 63 IPR038716 -
Mepo3g06633 110 Hamap 50S ribosomal protein L12 [rpl12]. 6 110 IPR027534 GO:0003735|GO:0005840|GO:0006414
Mepo3g06633 110 FunFam 60S acidic ribosomal protein P1 1 63 - -
Mepo3g06633 110 CDD Ribosomal_P1 5 109 - -
Mepo3g06633 110 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 1 110 - -
Mepo3g06633 110 PRINTS Ribosomal protein P2 signature 25 36 IPR001859 GO:0003735|GO:0005840|GO:0006412
Mepo3g06633 110 PRINTS Ribosomal protein P2 signature 97 108 IPR001859 GO:0003735|GO:0005840|GO:0006412
Mepo3g06633 110 PRINTS Ribosomal protein P2 signature 82 96 IPR001859 GO:0003735|GO:0005840|GO:0006412
Mepo3g06633 110 Pfam 60s Acidic ribosomal protein 22 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06633 Mepo-Chr3 80245278 80246873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06633 1 110 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 56.140 1.01e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06633 K02942 - rcu:8269526 130.568