Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06627 ATGCATATGTCACATACAAGGCAAAATAAGATCATGAGTCCAAACTTTGTTCCCAAACACGTTGGTGACACAACTTATACTAAGATTTTTGTTGGAGGGTTAGCTTGGGAGACCAAAAGAGACACACTCAAACGTTATTTTGATCAGTTTGGTGATATCTTAGAAGCTGTTGTCATCACTGACAGAACCACTGGAAAATCAAAAGGATATGGCTTTGTTACCTTCAAGGATCCAAATTCTGCTATACTAGCTTGTCAAAATCCTAATCCTATGATTGATGGAAGAAGAGCTAATTGTAATCTTGCATATCAAAAACCTGATCCATCTTTAACAGGAAGACAGAAATTCAATAGTCCTTCAAGGCATACTTCACCAGTCCAATGTCAAGGTTCCTCAACTTATTACAATCAACATATACCACAATATGCATTTCCTTATCCAGTTTACAGGTACCCTCACCCTGGTTATCTTCGTCCACAAGACATATATGAAATGAGCTATAATAATGCATATGGTGGTGGACCTCAATTTCCATTTCGCTGGTTTCCAGCATATTACCAACCATATTATGGCCTTAGTAGACAGTTAATTCCAACAGCATATATGAAAAGGACACAATTCCATGATGTTGTTGGCATATCAGAACCTATTTCACCTTCTACTTCAATTTCCAGCACCGGAGTTATCACAGAGACTGTAGCTCCAACAAGAGTGGTAGAACCTTTCAAAGATCAAACATCTTCAGCTTAA 750 0.3787 MHMSHTRQNKIMSPNFVPKHVGDTTYTKIFVGGLAWETKRDTLKRYFDQFGDILEAVVITDRTTGKSKGYGFVTFKDPNSAILACQNPNPMIDGRRANCNLAYQKPDPSLTGRQKFNSPSRHTSPVQCQGSSTYYNQHIPQYAFPYPVYRYPHPGYLRPQDIYEMSYNNAYGGGPQFPFRWFPAYYQPYYGLSRQLIPTAYMKRTQFHDVVGISEPISPSTSISSTGVITETVAPTRVVEPFKDQTSSA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06627 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 27 104 IPR000504 GO:0003723
Mepo3g06627 249 Gene3D - 2 117 IPR012677 -
Mepo3g06627 249 PANTHER BOULE-RELATED 16 201 - -
Mepo3g06627 249 CDD RRM_RBM24_RBM38_like 27 102 - -
Mepo3g06627 249 SUPERFAMILY RNA-binding domain, RBD 10 121 IPR035979 GO:0003676
Mepo3g06627 249 SMART rrm1_1 28 100 IPR000504 GO:0003723
Mepo3g06627 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 29 88 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06627 Mepo-Chr3 80173909 80175844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06627 23 106 C2H2 Transcription Factor Family AT2G19380 41.667 1.71e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06627 - - cam:101508568 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06627 3 80173909 80175844 Mepo3g06627 3 80173909 80175844 ECH