Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06619 ATGTTGCTCGGGCGACATCTTGCCAGGCAGGATTGTTGTCACCATGGCGACATGTTTTGGTCAAACAGTTGGAAACAAGATTCTAATCACTGTACCTGGTATGGTGTCAACTGTTCCAAAGTTGATGAAAGAGTTCAATCTCTAAACTTATCAGGACTTAGCCTCTCTGGTAAATTACCTTCTAATCTCTCCAACCTCACTTACCTTCATTCACTTGACCTTTCCGAAAACAGTTTTCATGGCCAAATTCCCTCCCAATTTTCTCATCTCTCACTCCTCAATGTCATTCAGTTAGCTTTCAACAATCTCAATGGTACACTTCCACCACAATTGGGTCAACTTCATAATCTACAAAGCTTAGACTTTTCTGTCAATAATCTCACAGGTAAAATTCCTTCAACCTTTGGCAATCTCTTTTCACTCGAGAATCTTTCCATGGCAAGAAACAGGCTTGAGGGTGAAATTCCAAGTGAATTGGGCAATCTCCATAATCTTTCAAGACTTCAACTCTCAGAGAATAACTTCACCGGCAAGCTTCCTACTTCTATCTTCTTCAACTTATCTTCTTTAGTTTTCTTATCCCTCACAAAAAATAATCTATCAGGCGAGTTGCCACAAAATTTCGCCGAAGCCTTTCCGAATATAGGGACACTTGCTTTGGCAACCAATAGATTTGAAGGGGTAATTCCGAGTTCCATAGCCAATTCATCACATCTTCAAATTATTGATCTTACTAACAATAGGTTTCATGGGCCAATACCTCTTTTCAACAACTTGAAAAACCTCACTCATTTGTATCTCAGTAAGAATAATCTCACCTCCACTACCTCATTGAATTTTCAGTTCTTTGATTCCCTTCGAAACTCAACTCAGTTGCAAATTCTTATGGTCAATGATAACAACTTGACCGGGGAACTTCCAAGTTCTGTTGACTATCTTTCAAGCAATCTACAACAGTTTTGTGTTGCTAATAATCAGCTAACTGGAAGCATTCCTCATGGACTGAAGAAGTTTCAAAATCTCACATCCTTCTCTTTTGAACAGAATTATTTCACAGGAGAGTTACCATTAGAATTAGGAACACTCAAGAAATTGGTGCAGCTTTTGATACACCAAAATAAATTGTCTGGTGAAATTCCAGACATATTTGGCAATTTTTCAAATCTGATTACTCTTGGAATAGGAAACAACCAGTTCTCAGGTAAAATTCACGCGAGTATAGGACGATGCAAGAGATTGAATTATCTGGACTTGCAAATGAATAAGCTTGTTGGTGTCATACCAATGGAGATTTTTCAACTCTCTAGCTTGACAACTTTATACTTACATGGAAATTCTCTGAATGGTTCGCTTCCTCCTTCGTTCAAGATGGAGCAGCTAGTGGCCATGGTTGTTTCAGACAACATGCTGTCAGGGAACATTCCTAAAATCGAAGTTGACGGATTGAAAACACTAGTGATGGCAAGAAACAATTTTAGAGGCTCAATTCCAAATAGTCTAGGGGATTTAGCATCCCTTAAGAAGCACAAGGAGGAGAAAACAATTTTGTCATCAACCACTCTATTGGGGCTGACTCAAAATATATCCTATGGTGATATTAAGCTAGCTACAAACAATTTTTCAGCTACAAACTTGGTTGGAAAAGGAGGGTTTGGATCTGTTTACAAAGGTGTGTTCAACATAAGCACTTTTGAAAGTCAAACAACTACACTTGCTGTTAAAGTTCTTGACCTGCAACAACGCAAAGCATCTCAGAGTTTCAGTGTTGAATGTGAAACTTTAAAAAATATTAGGCATCGGAATTTGGTAAAGGTGATTACTTCTTGCTCCAGCACTGACTACAAGGGGGATGATTTTAAGGCCCTTGTTTTGCAATTCATGCCTAATGGTAATTTGGAGATGAGTTTATACCCGGAAGATTTTGAGTCAGGATCTTCTCTAACCTTGTTGCAAAGGTTAAACATTGCCATTGATGTTGCATCTGCCATGGACTACTTGCACCATGACTGTGATCCACCAATAGTCCATTGTGATCTGAAACCTGCCAATGTCCTACTAGATGAAGATATGGTTGCACATGTGGCAGATTTTGGATTGGCAAGGTTTCTTTCTCAAAATCCGTCAGAGAAACATAACAGCACTCTAGAATTGAAGGGATCAATCGGCTATATCGCGCCAGAATATGGTCTAGGAGGCAAGGCTTCAACTAGTGGTGATGTGTACAGTTTTGGGATCCTACTATTGGAGATGTTCATAGCCAAAAAACCAACAAATGAAATTTTCAAAGAGGAATTAAGCATGAAGAGATTTGCATCAAACATGGATGAAAAGCAATTATTGAAGGTTGTTGATCAAAGACTTGTTAACTGTTACGAATATACGACACAAAATTCTAGCGGTGATAGTCATAGTAGTGAGTCTGGCAACATCAGCTACAGTGATGATAGTAATGCACATTGGATGTATAAAGCTGAAGAATGCATAACTGCTGCAATGAGAGTTGGCTTATCATGTGTAGCACATCGTCCCAAAGATCGGTGTACCATGAGAGAAGCCTTATCAAAATTGCATGAAATTAAGCGGTATATACTAGGCTTGTGA 2601 0.3887 MLLGRHLARQDCCHHGDMFWSNSWKQDSNHCTWYGVNCSKVDERVQSLNLSGLSLSGKLPSNLSNLTYLHSLDLSENSFHGQIPSQFSHLSLLNVIQLAFNNLNGTLPPQLGQLHNLQSLDFSVNNLTGKIPSTFGNLFSLENLSMARNRLEGEIPSELGNLHNLSRLQLSENNFTGKLPTSIFFNLSSLVFLSLTKNNLSGELPQNFAEAFPNIGTLALATNRFEGVIPSSIANSSHLQIIDLTNNRFHGPIPLFNNLKNLTHLYLSKNNLTSTTSLNFQFFDSLRNSTQLQILMVNDNNLTGELPSSVDYLSSNLQQFCVANNQLTGSIPHGLKKFQNLTSFSFEQNYFTGELPLELGTLKKLVQLLIHQNKLSGEIPDIFGNFSNLITLGIGNNQFSGKIHASIGRCKRLNYLDLQMNKLVGVIPMEIFQLSSLTTLYLHGNSLNGSLPPSFKMEQLVAMVVSDNMLSGNIPKIEVDGLKTLVMARNNFRGSIPNSLGDLASLKKHKEEKTILSSTTLLGLTQNISYGDIKLATNNFSATNLVGKGGFGSVYKGVFNISTFESQTTTLAVKVLDLQQRKASQSFSVECETLKNIRHRNLVKVITSCSSTDYKGDDFKALVLQFMPNGNLEMSLYPEDFESGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPANVLLDEDMVAHVADFGLARFLSQNPSEKHNSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMFIAKKPTNEIFKEELSMKRFASNMDEKQLLKVVDQRLVNCYEYTTQNSSGDSHSSESGNISYSDDSNAHWMYKAEECITAAMRVGLSCVAHRPKDRCTMREALSKLHEIKRYILGL 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06619 866 SUPERFAMILY Protein kinase-like (PK-like) 516 856 IPR011009 -
Mepo3g06619 866 ProSiteProfiles Leucine-rich repeat profile. 261 282 IPR001611 GO:0005515
Mepo3g06619 866 SMART LRR_typ_2 259 285 IPR003591 -
Mepo3g06619 866 SMART LRR_typ_2 434 457 IPR003591 -
Mepo3g06619 866 SMART LRR_typ_2 187 210 IPR003591 -
Mepo3g06619 866 SMART LRR_typ_2 66 89 IPR003591 -
Mepo3g06619 866 SMART LRR_typ_2 114 137 IPR003591 -
Mepo3g06619 866 SMART LRR_typ_2 162 186 IPR003591 -
Mepo3g06619 866 SMART LRR_typ_2 362 385 IPR003591 -
Mepo3g06619 866 ProSitePatterns Protein kinases ATP-binding region signature. 546 574 IPR017441 GO:0005524
Mepo3g06619 866 Gene3D Phosphorylase Kinase; domain 1 523 626 - -
Mepo3g06619 866 Pfam Protein tyrosine and serine/threonine kinase 543 792 IPR001245 GO:0004672|GO:0006468
Mepo3g06619 866 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 39 287 - -
Mepo3g06619 866 Pfam Leucine Rich Repeat 261 283 IPR001611 GO:0005515
Mepo3g06619 866 Pfam Leucine Rich Repeat 116 138 IPR001611 GO:0005515
Mepo3g06619 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Mepo3g06619 866 ProSiteProfiles Protein kinase domain profile. 540 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06619 866 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 288 553 - -
Mepo3g06619 866 Gene3D Ribonuclease Inhibitor 212 278 IPR032675 -
Mepo3g06619 866 Gene3D Ribonuclease Inhibitor 14 109 IPR032675 -
Mepo3g06619 866 Gene3D Ribonuclease Inhibitor 110 211 IPR032675 -
Mepo3g06619 866 Gene3D Transferase(Phosphotransferase) domain 1 627 863 - -
Mepo3g06619 866 Gene3D Ribonuclease Inhibitor 279 380 IPR032675 -
Mepo3g06619 866 SMART LRR_sd22_2 114 146 - -
Mepo3g06619 866 SMART LRR_sd22_2 314 343 - -
Mepo3g06619 866 SMART LRR_sd22_2 259 280 - -
Mepo3g06619 866 FunFam LRR receptor-like serine/threonine-protein kinase EFR 510 626 - -
Mepo3g06619 866 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 528 858 - -
Mepo3g06619 866 SUPERFAMILY RNI-like 182 507 - -
Mepo3g06619 866 Gene3D Ribonuclease Inhibitor 381 479 IPR032675 -
Mepo3g06619 866 SMART serkin_6 540 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06619 866 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 627 865 - -
Mepo3g06619 866 SUPERFAMILY L domain-like 18 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06619 Mepo-Chr3 80133908 80138767 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06619 22 861 Receptor kinase-like Gene Family AT3G47570 35.223 6.41e-176 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo3g06619 PK_Tyr_Ser-Thr 4.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06619 - - mtr:11428205 854.744