Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06618 ATGGTCCAAATACGACTTATTTTGCTCCTATCTTTCTTACTTCATAATTTTCATGTCATCATTTGCGACAACAACACAGACAAAGATGTACTTCTATCATTCAAATTACAAGTAACTGATCCAAACAATGCTTTGTCCAGTTGGAAACAAGATTCTAATCACTGTACCTGGTATGGTGTCAACTGTTCCAAAGTTGATGAAAAAGTTCAATCTCTCACACTATCAGGACTTGGCCTCTCTGGTAAACTACCTTCTAATCTCTCCAACCTCACTTACCTTCATTCACTTGACCTTTCCAATAACAGTTTTCATGGCCAAATTCCCTCCCAATTTTCTCATCTCTCACTCCTCAATGTCATTCAGTTAGCTTTGAATGATCTCAATGGCACACTTCCACCACAATTGGGTCAACTGCATAATCTACAAAGCTTAGACTTTTCTGTCAATAATCTCACAGGTAAAATTCCTTCAACCTTTGGCAATCTTTTTTCTCTCAAGAATCTTTCCATGGCAAGAAACAGGCTTGAGGGTGAAATTCCAAGTGAATTGGGCAATCTCCACAATCTTTCAAGACTTCAACTCTCAGAGAATAACTTCACTGGCAAGCTTCCTACTTCTATCTTCTTCAACTTATCTTCCTTAGTTTTCTTATCCCTCACAAAGAACAATCTATCAGGCGAGTTGCCACAAAATTTCGGCGATGCCTTTCCGAATATAGAGACACTTTATTTGGCAACCAATAGATTTGAAGGGGTAATTCCGAGTTCCATAGCCAATTCATCACATCTTCAAATTATTGATCTTGCTAACAATAGGTTTCATGGACCAATACCTCTTTTCAAACACTTGAAAAACCTCACTCGTTTGATTCTCAGTAATAATAGTCTCACTTCCACCACATCATTGAATTTTCAGTTCTTTGAATCCCTTAGAAACTCCACTCTGTTGCAAATTCTTATGGTCAATGATAACAACTTGACCGGGGAACTTCCAAGTTCGGTTGATTATCTTTCAAGCAATCTACTATGGTTTTGTGTTGCTAATAATCAGCTAAATGGAAGCATTCCTCATGGAATGAAGAAGTTTCAAAATCTCACATCCTTCTCTTTTGAACAGAATTATTTCACAGGAGAGTTACCATTAGAATTAGGAACACTCAAGAAATTGGAGAGGCTATTGATATTCCAAAATAGATTGTCTGGTGAAATTCCAGACATATTTGGCAATTTTACAAATCTGTTTATTCTAGCAATAGGAAACAACCAGTTCTCAGGTAGAATTCATGCAAGTATAGGACAATGCAAGAGATTGAATTTTCTGGACTTGCGAGTGAATAAGCTTGCTGGTGTCATACCAATGGAGATTTTTCAACTCTCTGGCTTGACAACTTTATACTTACATGGAAATTCTCTGAATGGTTCGCTTCCTCTTCAATTCAACATGGAACAGCTAGAGACCATGGTTGTTTCGGACAACAAGCTGTCAGGGAACATTCCTAAAATCGAAGTTAACGGATTAAAAACACTTATGATGGCAAGAAACAATTTTAGTGGCTCAATTCCAAATAGTCTAGGGGATTTAGCATCCCTTGTGACTTTAGATCTATCATCAAACAATCTCACTGGTCCAATTCCCGTGAGTTTAGAAAAGCTTGAGTATATGATGAAATTAAATTTGTCCTTCAACAAATTGGAAGGGGAAGTTCCTATGGAAGGTGTTTTTATGAACCTAAGCCAGGTTGATCTCCAAGGTAACAACAAACTATGTGGCGTTAACAATGAAGTTATCCACAAGTTAGGAGTCACTTTGTGTGTTGCAGGTAAGAAAAACAAGAGAAACATTTTACTACCTATCATACTAGCGATTATAGGTGCTGCTGTTTTGTTCACTTCAATGATCTATCTATTTTGGCTGCTAATGTCCTTAAAGAAGAAACACAAGGCGGAGAAAACAAGTTTGTCATCAACTACTATAAAAGGGTTGCATCAAAATATATCCTATGGTGATATTAGGCTTGCTACAAATAATTTTTCATCTGCAAACATGGTTGGAAAAGGAGGCTTTGGCTCTGTTTACAAGGGTGTGTTCAACATCAGCACTTATGAAAGTCAAACCACCACGCTTGCTGTTAAAGTTCTTGACCTGCAACAAAGCAAAGCCTCTCAGAGTTTTAGTGCAGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAATCTGGTAAAGGTGATCACTTCTTGCTCCAGCACTGACTACAAGGGGGATGATTTTAAGGCCCTTGTTTTGCAATTCATGCCTAATGGTAATTTGGAGATGAATTTATACCAGGAAGATCTTGCGTCAGGATCTTCGCTAACCTTGTTGCAAAGGTTAAACATTGCAATTGATGTTGCATCTGCCATGGACTACTTGCACCATGACTGTGATCCACCAATAGTCCATTGTGATCTGAAACCTGGCAATGTTCTACTAGATGAAGATATGGTTGCACATGTAGCAGATTTTGGATTGGCTAGGTTTCTCTCTCAAAATCCATCAGAGAAACATAACAGCACCCTAGAACTGAAGGGATCAATCGGCTATATCGCCCCAGAATATGGTCTAGGAGGCAAGGCTTCAACTAGTGGTGATGTGTACAGTTTTGGGATCCTACTACTAGAGATGTTGATAGCCGAAAAACCAACAAATGAAATGTTCAAAGAAGAATTAAGCATGAACAGATTTGTATCAGACATGGATGACAAGCAATTACTAAAGGTTGTTGATCAAAGGCTTATTAACCATTACGAATATTCGACACAAATTTCCAGCAGTGATAGTCATAGTGTTGAGTCTGGCAGCATCAGCTATAGTGGTGGTAGTAACTCACATTGGATGCACAAAGCTGAGGAGTGCATAGCTGCTACAATGAGAGTTGGCTTGTCATGTATAGCCCATCATCCCAAAGATCGGTGTACCATGAGAGAAGCCTTATCAAAATTGCATGGAATTAAGCAGTCTATACTAGGCTTGTGA 3012 0.3848 MVQIRLILLLSFLLHNFHVIICDNNTDKDVLLSFKLQVTDPNNALSSWKQDSNHCTWYGVNCSKVDEKVQSLTLSGLGLSGKLPSNLSNLTYLHSLDLSNNSFHGQIPSQFSHLSLLNVIQLALNDLNGTLPPQLGQLHNLQSLDFSVNNLTGKIPSTFGNLFSLKNLSMARNRLEGEIPSELGNLHNLSRLQLSENNFTGKLPTSIFFNLSSLVFLSLTKNNLSGELPQNFGDAFPNIETLYLATNRFEGVIPSSIANSSHLQIIDLANNRFHGPIPLFKHLKNLTRLILSNNSLTSTTSLNFQFFESLRNSTLLQILMVNDNNLTGELPSSVDYLSSNLLWFCVANNQLNGSIPHGMKKFQNLTSFSFEQNYFTGELPLELGTLKKLERLLIFQNRLSGEIPDIFGNFTNLFILAIGNNQFSGRIHASIGQCKRLNFLDLRVNKLAGVIPMEIFQLSGLTTLYLHGNSLNGSLPLQFNMEQLETMVVSDNKLSGNIPKIEVNGLKTLMMARNNFSGSIPNSLGDLASLVTLDLSSNNLTGPIPVSLEKLEYMMKLNLSFNKLEGEVPMEGVFMNLSQVDLQGNNKLCGVNNEVIHKLGVTLCVAGKKNKRNILLPIILAIIGAAVLFTSMIYLFWLLMSLKKKHKAEKTSLSSTTIKGLHQNISYGDIRLATNNFSSANMVGKGGFGSVYKGVFNISTYESQTTTLAVKVLDLQQSKASQSFSAECEALKNVRHRNLVKVITSCSSTDYKGDDFKALVLQFMPNGNLEMNLYQEDLASGSSLTLLQRLNIAIDVASAMDYLHHDCDPPIVHCDLKPGNVLLDEDMVAHVADFGLARFLSQNPSEKHNSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMLIAEKPTNEMFKEELSMNRFVSDMDDKQLLKVVDQRLINHYEYSTQISSSDSHSVESGSISYSGGSNSHWMHKAEECIAATMRVGLSCIAHHPKDRCTMREALSKLHGIKQSILGL 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06618 1003 SUPERFAMILY L domain-like 25 311 - -
Mepo3g06618 1003 Pfam Leucine rich repeat N-terminal domain 24 63 IPR013210 -
Mepo3g06618 1003 ProSiteProfiles Leucine-rich repeat profile. 285 306 IPR001611 GO:0005515
Mepo3g06618 1003 FunFam Inactive leucine-rich repeat receptor-like protein kinase 312 599 - -
Mepo3g06618 1003 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Mepo3g06618 1003 PANTHER LEUCINE RICH REPEAT KINASE 2 314 997 - -
Mepo3g06618 1003 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 764 1002 - -
Mepo3g06618 1003 Gene3D Ribonuclease Inhibitor 23 178 IPR032675 -
Mepo3g06618 1003 SUPERFAMILY Protein kinase-like (PK-like) 654 993 IPR011009 -
Mepo3g06618 1003 SUPERFAMILY RNI-like 206 566 - -
Mepo3g06618 1003 Pfam Leucine rich repeat 237 296 IPR001611 GO:0005515
Mepo3g06618 1003 Pfam Protein tyrosine and serine/threonine kinase 681 902 IPR001245 GO:0004672|GO:0006468
Mepo3g06618 1003 FunFam LRR receptor-like serine/threonine-protein kinase EFR 647 763 - -
Mepo3g06618 1003 SMART LRR_typ_2 283 309 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 458 481 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 527 551 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 90 113 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 386 409 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 138 161 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 211 234 IPR003591 -
Mepo3g06618 1003 SMART LRR_typ_2 186 210 IPR003591 -
Mepo3g06618 1003 Gene3D Transferase(Phosphotransferase) domain 1 764 1000 - -
Mepo3g06618 1003 ProSiteProfiles Protein kinase domain profile. 677 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06618 1003 SMART serkin_6 677 997 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06618 1003 Gene3D Phosphorylase Kinase; domain 1 657 763 - -
Mepo3g06618 1003 ProSitePatterns Protein kinases ATP-binding region signature. 683 711 IPR017441 GO:0005524
Mepo3g06618 1003 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Mepo3g06618 1003 Pfam Leucine Rich Repeat 529 551 IPR001611 GO:0005515
Mepo3g06618 1003 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 63 311 - -
Mepo3g06618 1003 Gene3D Ribonuclease Inhibitor 179 280 IPR032675 -
Mepo3g06618 1003 Gene3D Ribonuclease Inhibitor 281 598 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06618 Mepo-Chr3 80123223 80126783 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06618 24 998 Receptor kinase-like Gene Family AT3G47570 39.823 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo3g06618 PK_Tyr_Ser-Thr 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06618 - - mtr:11428205 1789.62