Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06616 ATGTCCTTAAAGAAGAAACATAAGGAGGAGAAAACAAGTTTGTCATCAACTCTAAATTGGTTGCATCAAAATGTATCCTATGGTGATATTAGGCTTGCTACAAACAATTTCTCAGATGCAAACTTGGTTGGAAAAGGAGGCTTTGGCTCTGTTTACAAGGGTGTGTTTAACATCAGCACTTATGAACGTCAAACAACGACGCTTGCTGTTAAAGTTCTTGACCTACAACAAAGCAAAGCCTCTCAGAGTTTTTCTGCAGAATGTGAAGCTTTGAAAAATGTTAGGCATCGGAATCTGAGGTTGAACATTGCCATTGATGGTGCATCTGCCGTGGACTACTTGCACCATGACTGTGATCCACCAATAGTCCATTGTGATCTGAAACCTGCCAATGTCCTACTAGATGAAAATATGGTTGCACATGTGGCAGATTTTGGATTGGCAAGGTTTCTCTCTCAAAATCCATCAGAGAAACATAGTAGCACTCTGGAACTGAAGGGATCGATCGGCTATATTGCCCCAGAATATGGTTTAGGTGGAAAGGCTTCAACTAGTGGAGATGTGTACAGTTTTGGGATCCTACTGCTAGAGATGTTCATAGCCAAAAAACCAACAGATGAGATTTTCAAAGAAGGAGTAAGCATGAACAAATTTGTATCATACATGGATGAGAAGAAATTACTGAAGGTTGTTGATCAAAGGCTTATTAACTATTATAGTGATGGTAACCCAGATTTGATGCATAAAGCTGAGGAGTCCATAGCTGCTGTAATGAGAGTTGGTTTGTCATGTGTATCATATCATCCCAAAGATCGGTGGACCATGAGAGAAGCCTTATCAAAATTGCATGGAATTAAGCTGTCTATCTTGGCTTGTGATGTTGGTCTCATGCCGTCTATACATGTTTAA 909 0.3993 MSLKKKHKEEKTSLSSTLNWLHQNVSYGDIRLATNNFSDANLVGKGGFGSVYKGVFNISTYERQTTTLAVKVLDLQQSKASQSFSAECEALKNVRHRNLRLNIAIDGASAVDYLHHDCDPPIVHCDLKPANVLLDENMVAHVADFGLARFLSQNPSEKHSSTLELKGSIGYIAPEYGLGGKASTSGDVYSFGILLLEMFIAKKPTDEIFKEGVSMNKFVSYMDEKKLLKVVDQRLINYYSDGNPDLMHKAEESIAAVMRVGLSCVSYHPKDRWTMREALSKLHGIKLSILACDVGLMPSIHV 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06616 302 ProSiteProfiles Protein kinase domain profile. 1 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06616 302 SMART serkin_6 37 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06616 302 Pfam Protein tyrosine and serine/threonine kinase 42 99 IPR001245 GO:0004672|GO:0006468
Mepo3g06616 302 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 99 - -
Mepo3g06616 302 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 76 293 - -
Mepo3g06616 302 SUPERFAMILY Protein kinase-like (PK-like) 13 282 IPR011009 -
Mepo3g06616 302 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Mepo3g06616 302 Gene3D Transferase(Phosphotransferase) domain 1 97 291 - -
Mepo3g06616 302 ProSitePatterns Protein kinases ATP-binding region signature. 43 71 IPR017441 GO:0005524
Mepo3g06616 302 Pfam Protein kinase domain 108 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06616 302 ProSitePatterns Serine/Threonine protein kinases active-site signature. 122 134 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06616 Mepo-Chr3 80103989 80105607 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06616 4 286 Receptor kinase-like Gene Family AT3G47570 39.412 1.34e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Mepo3g06616 Pkinase 1.9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06616 - - mtr:11428205 463.381