Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06615 ATGGGTGAGTTTCGCGTTCAAGACAAGGAACCTACAAAAAAAACCAACATTGTTGTTGGGTCGGTGCAGAGTTTTGAAGGTTTCTCTAATAATCATCACCACCGTTCATTCTTTGATAATCATGATTCTTCTGCTGCTGGTTATGGTCCCACAACATACAACATGTCTTTTGGGGGTGATTCTTCTTCTCTAGGTGCTAATGCTATCATTGATAATGGCGGTGTATCCTTAAATTTTCAACCTTTTCACAACATTTCTGCTTCCAACACAACCCTCAAAGTAGGTGGAATGGCGGCTTCAATAGGAATAGGGTATCCTCCTTTCACAAGTGCTCAATGGAGAGAGCTTGAAAGACAAGCTATGATTTACAAGTACTTGATGGCTTCACTTCCTGTTCCTTCTCATCTTCTTTCATTGGATAGTGGCTTCAATCTGAGGCTATCAAATAGGAACAACACTGATCCAGAGGCTGGTAGGTGCAGAAGAACAGATGGTAAAAAATGGAGATGTTCTAGAGATGTAGCTCCTAATAACAAGTACTGTGAAAGACATATGCATAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAACTTCACACAAATAGCAATAGCAATGGCAATAGTCATCATCAAATCAAAAGGGCTCGTTGTGATTCTAATCCTTTTTCTGTGCCTGATTTTACTGTGGCTGTTCCTAATCCAATTACAAGAAAATATGGATCTTCATCACATTTTCTTGCTTCCACTCCCCTTCATCCTTATCTCCAATCTTCCTTTTCTTTGCATAATAGCAGCTTTGAGGCTTCGAATAAGCAACCAAGGGGCTTGGAGTGGATGCTGAATGGAGATCCAATTTCCCTTGGTGCTTCTAATTCAGGATGGAACCCTCTGATGCATAACAACAAACTTGGAATTGCCAATGGAAGTTCCTATCATAATAACACTGAATCTCAGTATCTGAATTCATTTCCACTATATAACAGTTCTGAACTAGCTCAACATGAAAAACCCTTTCCTCTCTTGCTTAATCCCCTTGTTGTTCCAATGCAAACTCTCCAATCTGAGAAGCCAAGAGGTTTTAGTTTCATCGATGCTTGGTCTAATGCAGAGTCAGTGGAAAACAATGCCAACACCACCACCACCACCACTACCACTACCAACAATGGTTCTGCATCAGTTAGTAAATTATCCCTTTCATCTCTTGATCTATCAATGGGAGGTAGTACTGCTGTGAGTGAAGAAATGAGTACTATTGAAATGAGTGATGATAGTACTAAAATAGCATTCTCAAATTGGCTCAACCCAGAAGCACCTTGTTGGGTAGGTTCAACACCTGGTGGTCCACTAGCTGAAGTTCTAAGGCCAAGTAATGTTACCTCCATCAGTGATGCAACAAATTCGAATCCATCTTCACCTCTCACAACAACAAATCGTGTCGAATCCATTGGCTCTTCAGGAACAGGAATGGTATCATCTCCATCTGGTGTTTTGCATAATAAAACACTTGCTTCGTTTTCTGATAGTAGTGGTAATAGCAGTCCAAATGTTGCCTCATCAAGGGCTAATTCTGAAATTGCCTTACTCAATAAGTTTAATCATATTTCATATGTAAATTAA 1617 0.4032 MGEFRVQDKEPTKKTNIVVGSVQSFEGFSNNHHHRSFFDNHDSSAAGYGPTTYNMSFGGDSSSLGANAIIDNGGVSLNFQPFHNISASNTTLKVGGMAASIGIGYPPFTSAQWRELERQAMIYKYLMASLPVPSHLLSLDSGFNLRLSNRNNTDPEAGRCRRTDGKKWRCSRDVAPNNKYCERHMHRGRPRSRKPVELHTNSNSNGNSHHQIKRARCDSNPFSVPDFTVAVPNPITRKYGSSSHFLASTPLHPYLQSSFSLHNSSFEASNKQPRGLEWMLNGDPISLGASNSGWNPLMHNNKLGIANGSSYHNNTESQYLNSFPLYNSSELAQHEKPFPLLLNPLVVPMQTLQSEKPRGFSFIDAWSNAESVENNANTTTTTTTTTNNGSASVSKLSLSSLDLSMGGSTAVSEEMSTIEMSDDSTKIAFSNWLNPEAPCWVGSTPGGPLAEVLRPSNVTSISDATNSNPSSPLTTTNRVESIGSSGTGMVSSPSGVLHNKTLASFSDSSGNSSPNVASSRANSEIALLNKFNHISYVN 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06615 538 MobiDBLite consensus disorder prediction 187 211 - -
Mepo3g06615 538 MobiDBLite consensus disorder prediction 460 493 - -
Mepo3g06615 538 ProSiteProfiles WRC domain profile. 154 198 IPR014977 -
Mepo3g06615 538 ProSiteProfiles QLQ domain profile. 107 142 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo3g06615 538 PANTHER GROWTH-REGULATING FACTOR 5 83 392 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mepo3g06615 538 SMART QLQ_2 106 142 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo3g06615 538 Pfam QLQ 107 137 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mepo3g06615 538 Pfam WRC 155 197 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06615 Mepo-Chr3 80098155 80100478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06615 360 462 GRF Transcription Factor Family AT5G53660 37.398 4.34e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mepo3g06615 WRC 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06615 - - mtr:11444759 939.488
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06615 3 80098155 80100478 Mepo3g06615 3 80098155 80100478 ECH