Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06610 ATGGGTCATTGCTGCAGCAAAAGCATCGCAGTCGACAACGAAACTGTCGCCACCGATCACCACCACAAACCACCACCGCACCACACACCATCACCGCTTTCGGCTTCTCAACCTGTCTCCGGCGTCAGTGATGCTACTCCAGGAAGACAAACTCCGGCAACTTCTTTCTCCACAAGTCCGTTCAATAGTCCTCTTCCGGCAGGTGTGATGCCGTCTCCGGCGACGAAGACTCCGGGAAGGAAATTCAGGTGGCCACTTCCTCCACCGTCTCCGGCGAAGCCGATAATGGACCTGTACAGGAAGATGAAACCGAAAGATGGACCTATACCGGAGGAGCATGGAGAAGGTGGTGGTGGTGGTGGAGAGAGAACGTTGGATAAGAGTTTTGGTTATGGGAAGAATTTTGGGGCCAAATTTGAGCTTGGGAAGGAAGTTGGTCGAGGGCATTTTGGTCATACTTGTTGGGCTAAAGGGAAGAAAGGTGAACTTAAGGGAATTTCAGTAGCTGTCAAAATCATTACCAAAGCTAAGATGACTTCAGCAATAGCAATTGAAGATGTGAGGAGAGAGGTGAAAATGTTGAAGGCCTTATCTGGACATAGGAATTTGGTCAAGTTTTATGATGCATTTGAGGATGTGAATAACGTCTACATTGTGATGGAGTTGTGCGAGGGTGGAGAATTACTGGACAGAATTCTAGATAGAGGTGGAAGATATACAGAGGAAGACGCCAAAGTTATTCTTCTACAAATTCTGAATGTAGTTGCCTTTTGTCATCTTCAGGGAGTTGTTCATCGCGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGATGAGGATGCTGTTCTGAAAGTTATTGATTTTGGTCTATCTGATTTTGTTAGACCAGATCAGCGCCTCAATGATATTGTTGGTAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGCGTTGAAGCAGACCTGTGGAGTGTTGGAGTTATATCGTACATATTGTTATGTGGAAGTAGACCGTTTTGGGCACGGACAGAATCAGGAATTTTCCGGTCCGTGTTACGAGCAAATCCTAATTTTGATGATTCACCTTGGCCATCAATATCACCGGAAGCTAAAGACTTCGTGAAGAGACTTTTGAACAAGGACCACAGGAAAAGGATGACTGCTGCTCAAGCTTTATCTCACCCATGGTTGAGAGATGAAAAAAATGCCGTTCCTTTAGATATTTTGATTTACAAGTTAGTCAAGTCATACGTGCGCGCCTCGCCATTGAAACGTGCGGCACTGAAGGCTCTCTCAAAAGCATTACCGGAGGACGAGGTTACCTACCTTAGAGCACAATTTAGCCTCTTGGAACCTAAAGATGGTTGCGTTTCACTTGAGAATTTCAGAGTTGCTCTCATGAAAAATGCAACTGACGCCATGAAGGAGGCAAGGGTGCCTGACATTCTAAATTTGATGGATCCGCTCTCCTATAAAAGATTGGACTTCGAAGAGTTTTGCGCTGCTGCAATCAGTGTATACCAGCTGGAAGTTCATCCAGAATGGGAAAGAATTGCCACTACAGCTTATGATTATTTTGACGAGGCAGGGAACCGTGTCATTTCAGTCGAAGAGTTGGCACAGGAGATGAATTTAGGTCCTTCTGCTTACTCTCTAATGGGTGATTGGATCAGAAAATCTGATGGAAAACTCAGCTTGGTCGGATATACAAAGTATTTGCATGGTGTCACAATTCGTTCAAATACAAGACACAGATAG 1770 0.4475 MGHCCSKSIAVDNETVATDHHHKPPPHHTPSPLSASQPVSGVSDATPGRQTPATSFSTSPFNSPLPAGVMPSPATKTPGRKFRWPLPPPSPAKPIMDLYRKMKPKDGPIPEEHGEGGGGGGERTLDKSFGYGKNFGAKFELGKEVGRGHFGHTCWAKGKKGELKGISVAVKIITKAKMTSAIAIEDVRREVKMLKALSGHRNLVKFYDAFEDVNNVYIVMELCEGGELLDRILDRGGRYTEEDAKVILLQILNVVAFCHLQGVVHRDLKPENFLFVSKDEDAVLKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSVGVISYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALSHPWLRDEKNAVPLDILIYKLVKSYVRASPLKRAALKALSKALPEDEVTYLRAQFSLLEPKDGCVSLENFRVALMKNATDAMKEARVPDILNLMDPLSYKRLDFEEFCAAAISVYQLEVHPEWERIATTAYDYFDEAGNRVISVEELAQEMNLGPSAYSLMGDWIRKSDGKLSLVGYTKYLHGVTIRSNTRHR 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06610 589 ProSiteProfiles Protein kinase domain profile. 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06610 589 MobiDBLite consensus disorder prediction 13 123 - -
Mepo3g06610 589 SUPERFAMILY Protein kinase-like (PK-like) 138 423 IPR011009 -
Mepo3g06610 589 MobiDBLite consensus disorder prediction 33 65 - -
Mepo3g06610 589 Gene3D - 421 549 - -
Mepo3g06610 589 Gene3D - 440 508 - -
Mepo3g06610 589 SMART serkin_6 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06610 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Mepo3g06610 589 FunFam Calcium-dependent protein kinase SK5 311 406 - -
Mepo3g06610 589 FunFam CDPK-related kinase 1 132 227 - -
Mepo3g06610 589 CDD STKc_CAMK 138 400 - -
Mepo3g06610 589 MobiDBLite consensus disorder prediction 98 120 - -
Mepo3g06610 589 FunFam CDPK-related kinase 3 131 303 - -
Mepo3g06610 589 Pfam Protein kinase domain 139 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06610 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 562 - -
Mepo3g06610 589 FunFam CDPK-related kinase 1 437 508 - -
Mepo3g06610 589 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Mepo3g06610 589 Gene3D Transferase(Phosphotransferase) domain 1 229 420 - -
Mepo3g06610 589 ProSitePatterns Protein kinases ATP-binding region signature. 145 171 IPR017441 GO:0005524
Mepo3g06610 589 SUPERFAMILY EF-hand 434 578 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06610 Mepo-Chr3 80024164 80030850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06610 33 588 EF-hand Containing Proteins AT3G50530 57.886 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo3g06610 Pkinase 8.4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06610 - - gmx:100794478 993.416