Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06597 ATGGGAGGTTTTTCTGATACGAAGGTTTTACAAGACCTGTTGTTATACGCGGCTAGGGCGGCGCTGAGTTACTGGGTATTGGTCACGGGTCTCCGGTATCTCGACCCGAACCGTGAATCATCGAAGAAGGCTCTTGAACAGAAGAAAGAGATTGCTAAACGTCTTGGTCGTCCTCTTATTCAAACCAATTCCTATGAGGATGTAATTGCGTGTGATGTTATAAATCCTGACCACATCGATGTAGAATTTGACTCTATTGGGGGTCTTGAAACAATCAAACAAACTTTGTTTGAGCTTGTTATTCTACCCCTGCAACGACCAGACTTGTTTTCGCATGGCAAACTCCTTGGACCACAAAAGGGGGTCCTGTTGTATGGACCTCCTGGCACTGGGAAAACCATGCTCGCAAAAGCTATTGCCAAGGAGTCCGGAGCAGTTTTTATTAACGTGAGGATATCAAACCTGATGAGCAAATGGTTCGGGGATGCCCAAAAGCTTGTGGCTGCCGTATTTAGCTTGGCTCATAAACTTCAGCCATCCATTATATTCATTGATGAAGTAGACAGTTTTTTGGGTCAGCGTCGTTCATCGGATCACGAGGCTGTGTTAAACATGAAAACTGAGTTCATGGCTCTATGGGATGGATTCGCCACCGATCAAAGTGCTCGGGTTATGGTACTTGCAGCAACTAATCGCCCTTCAGAACTTGATGAAGCAATACTTCGGCGACTTCCTCAAGCCTTTGAAATTGGATATCCAGACCGGAAAGAGAGGGCTGATATATTGAAGGTTATCTTAAAGGGGGAGAAGGTTGAAGATAACATAGATTTCAGTTATATAGCTGGTTTATGCAAGGGTTACACTGGTTCAGATCTATTTGATCTTTGCAAGAAGGCCGCATATTTTCCTATTAGAGAAATACTGCATAATGAGAAGCATGGGGAACAATCCTGTGAACCTAGACCTTTGTCGCAGGCAGATTTGGAGAAGGCCCTTTCTACTTCAAGGAAGACATCGGTTGCTGCAAATGAATATAGTAGAATGACATCAAGAACGTCGTTTCCTGGCGAGTCAGGTGATTCTCAGGTTGAAGCTGCAATCAGGGAATTATCTAAGATTATGGGGGTTTCTCACATCCAAGTAGATGCTCAGGATTAA 1158 0.4413 MGGFSDTKVLQDLLLYAARAALSYWVLVTGLRYLDPNRESSKKALEQKKEIAKRLGRPLIQTNSYEDVIACDVINPDHIDVEFDSIGGLETIKQTLFELVILPLQRPDLFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAHKLQPSIIFIDEVDSFLGQRRSSDHEAVLNMKTEFMALWDGFATDQSARVMVLAATNRPSELDEAILRRLPQAFEIGYPDRKERADILKVILKGEKVEDNIDFSYIAGLCKGYTGSDLFDLCKKAAYFPIREILHNEKHGEQSCEPRPLSQADLEKALSTSRKTSVAANEYSRMTSRTSFPGESGDSQVEAAIRELSKIMGVSHIQVDAQD 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06597 385 Gene3D - 80 344 IPR027417 -
Mepo3g06597 385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 336 IPR027417 -
Mepo3g06597 385 FunFam ATPase family AAA domain-containing protein 1 80 257 - -
Mepo3g06597 385 ProSitePatterns AAA-protein family signature. 224 243 IPR003960 GO:0005524|GO:0016887
Mepo3g06597 385 SMART AAA_5 118 254 IPR003593 GO:0016887
Mepo3g06597 385 MobiDBLite consensus disorder prediction 339 359 - -
Mepo3g06597 385 Pfam ATPase family associated with various cellular activities (AAA) 122 251 IPR003959 GO:0005524|GO:0016887
Mepo3g06597 385 CDD RecA-like_ATAD1 85 250 - -
Mepo3g06597 385 Gene3D - 253 333 - -
Mepo3g06597 385 MobiDBLite consensus disorder prediction 339 361 - -
Mepo3g06597 385 Pfam AAA+ lid domain 274 309 IPR041569 -
Mepo3g06597 385 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 29 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06597 Mepo-Chr3 79874719 79880914 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06597 81 312 Calmodulin-binding Proteins AT3G56690 35.714 3.80e-38 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06597 K22530 - gmx:100796908 615.15