Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06560 ATGGAGTACTTCACCAAACCTGAAATCGCTCAAGGCTACAACTGGTTTTGCAATGTTCAACCTCAACCAAACGACACAGACAAAATCATGGATATTTCACCATTTGATGATTTCATTGGGCTTGATTGGGCATCTCAGTTTTCATACCAAAGTAATCAACTTTACACCAATGGGTTCAACCTCCCAAACCTTGATCAAAGTAGTTTTGAGGTCGATCAAAATCCCTTAAATGTTGTTTTACCTGACAAAGGTAAGAGTGGTTTTGTTGAAGCTTCCGTGAAAACAGGAAATCAGTTTGCGAGTGAAGGGGAGAATCAAGAATTGCCATTATTACCATTGCCAAGTAGCAGTAGCAGTACTAATATCACAAGGAAGAGGTCATCTTCATTGCAATTTGATGATATAAGGAAACATTTTGATGTTCCTTTAACAATGGCTGCTAAGAAAATGAATGTTTCTGTGACCCTTTTGAAAAAAAGATGCAGGGAGCTCAAAATTACTAGGTGGCCTCATAGAAAATTGAGGAGCTTGAATGTACTCATCAACAGCCTTAAGGAAAAGGGTCTGACTAGGGAGGTTGCCATGTTGGAGAAGCAAAAAAAGATGTTGGAGAAACTTCCGGGAATGGATTTGAATGAAGAAATCAAGAAGCTTAGGCAAGCATGTTTTAAAGATAAATCCAAGAAGAGAAGTTTAATTGGCCTCAACCCTTGA 714 0.3866 MEYFTKPEIAQGYNWFCNVQPQPNDTDKIMDISPFDDFIGLDWASQFSYQSNQLYTNGFNLPNLDQSSFEVDQNPLNVVLPDKGKSGFVEASVKTGNQFASEGENQELPLLPLPSSSSSTNITRKRSSSLQFDDIRKHFDVPLTMAAKKMNVSVTLLKKRCRELKITRWPHRKLRSLNVLINSLKEKGLTREVAMLEKQKKMLEKLPGMDLNEEIKKLRQACFKDKSKKRSLIGLNP 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06560 237 PANTHER PROTEIN RKD4 101 232 IPR044607 GO:0003700
Mepo3g06560 237 Pfam RWP-RK domain 130 177 IPR003035 -
Mepo3g06560 237 ProSiteProfiles RWP-RK domain profile. 117 199 IPR003035 -
Mepo3g06560 237 MobiDBLite consensus disorder prediction 104 124 - -
Mepo3g06560 237 Coils Coil 186 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06560 Mepo-Chr3 79527204 79529627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06560 130 234 AtRKD Transcription Factor Family AT5G53040 51.429 4.23e-31 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo3g06560 RWP-RK 2.2e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06560 - - psat:127081861 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06560 3 79527204 79529627 Mepo3g06560 3 79527204 79529627 ECH