Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06559 ATGGAGTTCTTCACCAAACCTGAAATCACTCAAGGCTACAACTGGTTTTGCAATGTTCAACCTCAACCAAACGACACAGACAAAATCATGGGTATTGCGCCATTTGATGATTTCTTTGAGTTTGATTGGGAAACTCAATTTTCATACCAAAGTAATCATTTTTACATGAATGACTTGGATGATCTTGAAAATTTCAACTTTGATTTCAACCTCCCACACCTTGATGATCAAAAATCCCTCAATGTTGTCTTGCCTGAGTTGGGGCATTGCAATGACAAAGGCGAGACTGTTGCTGAGAGTGGTTATGGTGAAGCTTCTGTGAAAACTGAAAGTGGGTTTGTGAGTTTTGTGAAGAAGGAGAATGAATGGGAGAATCAAGAATTGGCATTGCCTAGTAGCAGCACTAGCATCATTAGGAAGAGGTCATCTTCATTGCAGTATGATGACATAAAGAAACATTTTGATGTTCCTTTAACAATGGCTGCTAAGAAAATGAATGTTGGTGTGACCCATTTGAAAAAAAGATGCAGGGAGCTCAACATCACTAGGTGGCCTCACAGAAAATTGAGGAGTTTGATGTTACTCATCGACAACCTTAAGGAAAAGGGTTTGACTAAGGAAGTTGCCATGTTGGAGAAGCAAAGAAAGATGTTGGAGAAACTTCCGGGAATGGATTTGAATGATGAAATCAAGAAACTGAGGCAAGCATGCTTTAAAGCTAATTACAAGAACAGAAAATTACTTGCCCTCTGTCCTTGA 759 0.3926 MEFFTKPEITQGYNWFCNVQPQPNDTDKIMGIAPFDDFFEFDWETQFSYQSNHFYMNDLDDLENFNFDFNLPHLDDQKSLNVVLPELGHCNDKGETVAESGYGEASVKTESGFVSFVKKENEWENQELALPSSSTSIIRKRSSSLQYDDIKKHFDVPLTMAAKKMNVGVTHLKKRCRELNITRWPHRKLRSLMLLIDNLKEKGLTKEVAMLEKQRKMLEKLPGMDLNDEIKKLRQACFKANYKNRKLLALCP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06559 252 PANTHER PROTEIN RKD4 118 248 IPR044607 GO:0003700
Mepo3g06559 252 ProSiteProfiles RWP-RK domain profile. 132 214 IPR003035 -
Mepo3g06559 252 Coils Coil 201 221 - -
Mepo3g06559 252 Pfam RWP-RK domain 145 192 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06559 Mepo-Chr3 79522805 79524686 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06559 145 249 AtRKD Transcription Factor Family AT5G53040 59.048 5.60e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo3g06559 RWP-RK 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06559 - - psat:127081861 303.523