Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06549 ATGGGTAAGAAAGGAAGCAGTTGGTTCTCATCTGTAAAGAAAGTTTTCAAGTCTTCTTCTAGGGACTCAACTCTACAAGAGAACAAGAAGGAAAAGGAAGAGAATTGGCAGCATGAAGCAGCAGAGGAGGTATCTATGGAGCATTTTCCTGCATATAGTTCACCAGATATCACCAATGAAGGAAGCACCACATCAACACCCTTAACAGAAGAGAGAAATCATGCAATTGCCTATGCTGCAGCAACAGCAGCAGCTGCGGCTCAAGCAGCTGCTAGAGTTGTGAGATTGGCGGGTCATGGACGTCACTCTAAGGTTGAAAAAGCAGCAATACTCATTCAGTCCTACTATAGAGGATACCTAGCTCGACGTGCACTGCGTGCTTTGAAGGGATTAGTGAGATTGCAAGCACTTGTGAGGGGACATAATGTGCGGAAGCAAGCACAGATGACAATGCGATGCATGCAAGCATTGGTAAGGGTTCAGGCAAGAGTAAGAGCTCGCAGACTCCAATTGACTCATGACAAACACGAGAGGACAGTAGAGGAACGACCTCCTACGACAAAGTTAGACACAAATGGTTGGGACTATAGGCGTCAAAGTAGCCAGAAAATTAAGGACATTGATTTCAGGAAACATGGAACTACAATGAATAAAGAGAAAGCTCTTCCATACGCTTTCAACTGCCAGCAACTGCAGAAGCAATATTTGCACATAGACCCAAATGTTGATGATACTGAAAGTTACAGCAATGAGCGTGAAAGAGCCCAATTGGATTGGAACTGGTTGGAACGTTGGATGTTATCACAATCAAACAATGTTAGGCCCTTAGGGTTGGGGCCACTTGAGACCCCACCATATACACCCACTGATGACATGTCTGAAGAAAAAACAGTTGAAATGGACATGGTTGGACCACGAGACTCAATTCATGCAAACATGGGCCTCATGAAGCAAGAATTTCATGATTTAAGTCCAATCTCTAAACACCACCAACGACACCACAGTGGAGGTGTACCTAGCTATATGGCCCCAACACAGTCTGCAAAAGCCAAGATTAAAAGTCAAGGCCCATCAAAGCATCGGGCTTCGTTTGGGTCTTACTGGAGCTCGTCAGCACGGAGTCCTCCTACTGGGCTGGGCTATGATTCATCTGGCTCTGGTGGGGCCACTGCTGCTCATCCAATTACAAGAAGCCCAAGCCCAAAAATTAACGGGATTCGCCTTCAATCTAAACGGATTTCGGGTGCTGGTGTTGAGGATTGGCCCATTCCCTCTGGAGGTCATGGCTGGACAAGATTTGATTGA 1305 0.4598 MGKKGSSWFSSVKKVFKSSSRDSTLQENKKEKEENWQHEAAEEVSMEHFPAYSSPDITNEGSTTSTPLTEERNHAIAYAAATAAAAAQAAARVVRLAGHGRHSKVEKAAILIQSYYRGYLARRALRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRLQLTHDKHERTVEERPPTTKLDTNGWDYRRQSSQKIKDIDFRKHGTTMNKEKALPYAFNCQQLQKQYLHIDPNVDDTESYSNERERAQLDWNWLERWMLSQSNNVRPLGLGPLETPPYTPTDDMSEEKTVEMDMVGPRDSIHANMGLMKQEFHDLSPISKHHQRHHSGGVPSYMAPTQSAKAKIKSQGPSKHRASFGSYWSSSARSPPTGLGYDSSGSGGATAAHPITRSPSPKINGIRLQSKRISGAGVEDWPIPSGGHGWTRFD 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06549 434 Pfam IQ calmodulin-binding motif 106 126 IPR000048 GO:0005515
Mepo3g06549 434 Pfam IQ calmodulin-binding motif 132 147 IPR000048 GO:0005515
Mepo3g06549 434 Gene3D - 102 156 - -
Mepo3g06549 434 MobiDBLite consensus disorder prediction 23 39 - -
Mepo3g06549 434 MobiDBLite consensus disorder prediction 347 393 - -
Mepo3g06549 434 ProSiteProfiles IQ motif profile. 129 156 IPR000048 GO:0005515
Mepo3g06549 434 ProSiteProfiles IQ motif profile. 106 133 IPR000048 GO:0005515
Mepo3g06549 434 SMART iq_5 127 148 IPR000048 GO:0005515
Mepo3g06549 434 SMART iq_5 104 126 IPR000048 GO:0005515
Mepo3g06549 434 Pfam Protein of unknown function (DUF4005) 324 362 IPR025064 -
Mepo3g06549 434 MobiDBLite consensus disorder prediction 1 39 - -
Mepo3g06549 434 PANTHER IQ-DOMAIN 5-RELATED 1 375 - -
Mepo3g06549 434 MobiDBLite consensus disorder prediction 327 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06549 Mepo-Chr3 79461047 79465463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06549 1 402 IQD Protein Family AT3G49260 44.889 4.44e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06549 - - psat:127081873 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06549 3 79461047 79465463 Mepo3g06549 3 79461047 79465463 ECH