Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06539 ATGGAGTACGGAAGGTTAGGACTATCCGACCCTGGTGGCTCGACACCCTCCGAACCAACAAACATTACCAAACCTAGATCTTCAAAGAAGAAGATCATTTTCCTCTCACTCCTCGCCGTGGTACTAATTATCGCCTCCACTGTCTCCGCCGCAATGCTCACCGGAATTCACTCCCACACTACATCCGAACCAAAAAACCCTACTCTCCGACGTAACCCAACACAAGCTATCTCTAACACATGCAGCAAAACTCGTTTTCCTTCACTCTGCATCAACTATCTTCTCGATTTCCCTGACTCCACAGTGGCATCTGAGAAAGATCTTGTTCACATTTCCCTCAACGTGACGCTACAGCATCTCTCCAAAGCACTATACACCTCCGCCTCTATCTCCTCCACCGTCGGCATGAACCCTTACATCCGTGCCGCTTACACAGACTGTCTTGAACTTCTAGACAATTCCGTCGACGCTCTTGCTCGAGCACTCTCCTCCGCCGTACCTTCCTCCTCCTCCAACGGTGCTGTTAAGCCTCTTAAATCGTCATCCACCGAAGATGTCCTCACGTGGCTGAGTGCTGCGCTCACTAACCAAGACACGTGCGCCGAGGGTTTTGCCGACACTTCCGGCGATGTTAAGGATCAGATGACGAATAACTTAAAAGACTTGTCGGAGCTTGTGAGTAATTGTTTAGCCATTTTCTCTGCCGGTGGTGGTGATGATTTCTCCGGCGTTCCGATAGGGAATAGGAGAAGGTTAATGACAATGCCAGAACCAGAGGATGATTTTCCAGTATGGTTGAAGAGAAGAGAAAGGAGATTGTTGAGTTTGCCGGTGACGGAGATACAAGCTGACGTGGTTGTTTCAAAAGACGGTAACGGAACGGTGAAAACTATATCGGAAGCTCTTAAGAAGATACCTGAGTATGGTAACCGACGGTTCATTATCTATATCAAACAAGGAAGGTACGAAGAGGACAATTTAAAGGTGGGAAGGAAGAAAACTAATGTTATGATCATAGGAGACGGAAAGGGAAAGACAGTGATCACAGGGGGAAAAAATGTTATGCAAAACTTGACAACATTTCACACTGCTTCCTTTGCTGCAAGTGGTCCAGGTTTTATTGCAAGAGACATGACATTTGAGAACTACGCCGGACCAGCAAAGCACCAAGCAGTGGCCCTCCGTGTTGGATCGGACCACGCGGTGGTTTACCGTTGCAACATCATTGGATATCAAGACACAATGTATGCACATTCAAATCGTCAATTTTACCGTGAATGTGACATTTACGGTACGGTAGACTTCATATTTGGCAATGCTGCAGTTGTTTTTCAAAACTGTAGCCTCTATGCAAGAAAGCCCATGCCCTACCAAAAAAACACCATCACAGCCCAAAACAGAAAAGACCCAAATCAGAACACTGGTATATCCATCCACAACTGTAGGATCCTAGCCACACAAGATCTTGAAGCATCCAAGGGAAATTTCACTACATATCTTGGTCGTCCATGGAAACTATACTCTAGAACAGTGTACATGTTATCATACATGGGGGATCATGTACATCCACGTGGATGGTTAGAGTGGAATACAACATTTGCTTTAGACACTTTGTATTATGGTGAATACATGAATTATGGACCTGGTGGAGCTATTGGGCAAAGGGTAAAGTGGCCAGGGTATCGGGTTATTACGTCCACCGTGGAAGCAAATAGATTCACGGTGGCCCAATTCATATCGGGGTCCACTTGGTTGCCCTCCACTGGGGTGGCATATGTAGCTGGCTTATCCACTTGA 1797 0.4636 MEYGRLGLSDPGGSTPSEPTNITKPRSSKKKIIFLSLLAVVLIIASTVSAAMLTGIHSHTTSEPKNPTLRRNPTQAISNTCSKTRFPSLCINYLLDFPDSTVASEKDLVHISLNVTLQHLSKALYTSASISSTVGMNPYIRAAYTDCLELLDNSVDALARALSSAVPSSSSNGAVKPLKSSSTEDVLTWLSAALTNQDTCAEGFADTSGDVKDQMTNNLKDLSELVSNCLAIFSAGGGDDFSGVPIGNRRRLMTMPEPEDDFPVWLKRRERRLLSLPVTEIQADVVVSKDGNGTVKTISEALKKIPEYGNRRFIIYIKQGRYEEDNLKVGRKKTNVMIIGDGKGKTVITGGKNVMQNLTTFHTASFAASGPGFIARDMTFENYAGPAKHQAVALRVGSDHAVVYRCNIIGYQDTMYAHSNRQFYRECDIYGTVDFIFGNAAVVFQNCSLYARKPMPYQKNTITAQNRKDPNQNTGISIHNCRILATQDLEASKGNFTTYLGRPWKLYSRTVYMLSYMGDHVHPRGWLEWNTTFALDTLYYGEYMNYGPGGAIGQRVKWPGYRVITSTVEANRFTVAQFISGSTWLPSTGVAYVAGLST 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06539 598 FunFam Pectinesterase 278 596 - -
Mepo3g06539 598 Pfam Plant invertase/pectin methylesterase inhibitor 76 232 IPR006501 GO:0004857
Mepo3g06539 598 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 234 IPR035513 -
Mepo3g06539 598 NCBIfam pectinesterase inhibitor domain 48 233 IPR006501 GO:0004857
Mepo3g06539 598 SUPERFAMILY Pectin lyase-like 281 595 IPR011050 -
Mepo3g06539 598 CDD PMEI-like_3 81 235 - -
Mepo3g06539 598 PANTHER PECTINESTERASE 42 586 - -
Mepo3g06539 598 MobiDBLite consensus disorder prediction 1 24 - -
Mepo3g06539 598 ProSitePatterns Pectinesterase signature 2. 429 438 IPR033131 -
Mepo3g06539 598 Pfam Pectinesterase 284 581 IPR000070 GO:0030599|GO:0042545
Mepo3g06539 598 SMART PMEI_2 72 232 IPR006501 GO:0004857
Mepo3g06539 598 Gene3D - 278 596 IPR012334 -
Mepo3g06539 598 FunFam Pectinesterase 73 236 - -
Mepo3g06539 598 Gene3D Invertase/pectin methylesterase inhibitor family protein 73 235 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06539 Mepo-Chr3 79376241 79380608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06539 14 597 Carbohydrate Esterase AT3G49220 66.610 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06539 - - gmx:100808236 880.552