Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06535 ATGAGTGACCTTGTTCAGTTTTCTGCAATGTCTGAGTATGATTTTGCAGCAGAAGGAGATCTGTTCAAAGCACCTGAACCGATGATTGAAGAGTCGGGCATTGACCTTGATCCCATGACAGCAGCCATCTCAATGATATCTTGTGGCGAAGATGTAAAGTCCACAGATATTTCTATTCTTCAAAATGAACAGCTTCTCAGCGATGTATTCTATGATTGCAAAAAGGATCTATTTGAAAAGGCGGGAATGGAGTCACCACTCTCTGAGATTCTAGAAATCAAGGTTCCATTACTGAACATTGACGAGAACATAATTCAAGAAAACAAGCCACTTCCCGATATGCCATTATTACCGAAGAGCGTTAGCTCAGGAAGTTTAAGTTCGATGGATTGGATGCATGGATCTGCTGCAATGAAGCCTGCTTTTCTTGGTATCTCAGGAATAGATTTTGATGCTGTTTATGGCATGCGAAGATCATTCAGTGAAGGAGATATAAAGACTCTTGGTAATGCTAATATGAACGTGGTCCAATCTCCTGTGGAGAGGCCGTTTTTTACCAGTAACTGCAGCAGTGAGGAGCGCCTACAAAAGCTCTCTAGATACAGGAACAAGAAGACAAAGAGGAATTTCGGGAGGAAAATCAAGTACGCTTGCAGGAAGGCTCTAGCTGACAGTCAACCAAGAGTCCGTGGAAGATTTGCAAAGAATGAAGAATCTGATCAGGCAAAGAAGGATTGA 738 0.4214 MSDLVQFSAMSEYDFAAEGDLFKAPEPMIEESGIDLDPMTAAISMISCGEDVKSTDISILQNEQLLSDVFYDCKKDLFEKAGMESPLSEILEIKVPLLNIDENIIQENKPLPDMPLLPKSVSSGSLSSMDWMHGSAAMKPAFLGISGIDFDAVYGMRRSFSEGDIKTLGNANMNVVQSPVERPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEESDQAKKD 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06535 245 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 123 240 IPR045281 GO:0009909
Mepo3g06535 245 MobiDBLite consensus disorder prediction 230 245 - -
Mepo3g06535 245 MobiDBLite consensus disorder prediction 224 245 - -
Mepo3g06535 245 Pfam CCT motif 194 236 IPR010402 GO:0005515
Mepo3g06535 245 ProSiteProfiles CCT domain profile. 194 236 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06535 Mepo-Chr3 79345844 79347966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06535 169 241 C2C2-CO-like Transcription Factor Family AT5G57660 40.000 4.36e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g06535 CCT 2.5e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06535 - - gmx:100814332 372.089