Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06533 ATGGCACTGTGTAGAACTGGGCCATACCCAATTTTGGAGAGTAATGTCCCAGCTTATTCGCATATAAATTTGTCGACAAGGCTTGTTTTACCCGTTCCCCTGCGTTTCGCTGGACAATCATCAAATGCAGGCAAGAGAAAGCACAAGGTAATATGCAGTTCTTCACTACGGAGATCTGCATCTGCTTCTTCCATGGAGTCACATGAAGAGGTTCCAAAGACCTCTTCGGTTTGCTTGGAGGAGGAAACAGATCATGTTTTGAGGTTCAAAATGTCAGACTTTAAGGTTTTAGACCGTGTTAGCATTGGCCTTGGTGGACGGGCAGATGAGGTGGTGTTTGAAGGCAAGGTGAAGGACAGTGGTAGCCCTTTGTATAACACAAGAGTTATACTTCGACAGCTTTATAGTTCCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTATTGAAGAAGCTGGTTCGCCGTAAACTTTTGTATCATTCCTACTCAATGCAAGTTCATGGCTATATCTCGTTGCCTGCAAGTGGTGGCAGTGGTTCATTTATCCTAGTCCACGGGTATCATGGTAGTTTTTCTCTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCACTGGACGAAGAATCTGTCAGGAAGGTAGGAGAAGACACAACTGGAGGTCCCGCTATTTCTAGGCAATTGCGACTAATTCGAATATTGATGAGAGATCTTCTAATTGGAGTGAATTACCTGCATAGTCATGGTCTTGCCCATACAGACTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGACAGACATATCAAAGTAGGTACACTGGGAAATGCCGCTGACTTTTGCGAGGATGGTTCAAATAGCGGCTCTATGGAAAACATGGACAGGCGACAGATGATGATTGCATTTGACATGAGATGCATGGGTTTCATAATGGCAAAAATGGTAATGGGAGAACTTATGGATCCTTTGATATTTGCAAAGTTCAAATCATTCCTCACAAAGGGAAATGATCCTTCATGTTTGCGACAACTTATGATGGAAATCCTCGGCAGAAACTCTCCGTATGGAAATGCAGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTAGCAACCAAACCTTCTCGGAGAATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTCTGTGGGCCAAGATGGCGAGTAGTCCCATCAATGGATATTATCAGATGGGGTCTAGGTTGCACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTATTGGAGATGTTGAATCCTCATCCAAAGCCAAAGAACTGGCTGGAGCTGCTTCCAGGAAAATGGCGCCTATTGTATTGCACTGGGAGGCATGTTGGGCTGACCCTTCGCCAACCTCCTGTCCGTGTACTAGTTGGAGATTTGCATTTAACTGTTAGTAGAGAATCAAAGTTGAAGGCCAACCTTTCCTTCGTCTCTGACATTGGATTCTCAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGGGTGCAGGTGAATTCTTCATTTATACTAAGAGCTGGGAGACGGTTATATCTGAAGCAAGACAATACCTCAGAGAGGCTCTCATTCCGCCCTTCCGGCAATGAGGAGGCTTTAGCTCAGAAATTTTCTAGCAAGAAATGGAGAAAAATAACCCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGTTTACGTCGGGTGATATTGATGTGACAATGAATCTTGATGATCCTTTAAATCAAAACATTGATACTGTTCAAAATGTTCTTCAAGAACTAAGAACACAAATTCCCCCTGAAATATTTGATTTGTCAAAGATTGTGTGTGGAACTTATGTGGACTCAAGGTTGCTCGTTCTTCGAGGGGTTAATGGATCAGCTCTCCTATTTACAAGGTCTTTTGTGGACACAGACAGTTCTAGTTAA 2034 0.44 MALCRTGPYPILESNVPAYSHINLSTRLVLPVPLRFAGQSSNAGKRKHKVICSSSLRRSASASSMESHEEVPKTSSVCLEEETDHVLRFKMSDFKVLDRVSIGLGGRADEVVFEGKVKDSGSPLYNTRVILRQLYSSQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVHGYISLPASGGSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRILMRDLLIGVNYLHSHGLAHTDLRLENVHISPIDRHIKVGTLGNAADFCEDGSNSGSMENMDRRQMMIAFDMRCMGFIMAKMVMGELMDPLIFAKFKSFLTKGNDPSCLRQLMMEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSRRISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPHPKPKNWLELLPGKWRLLYCTGRHVGLTLRQPPVRVLVGDLHLTVSRESKLKANLSFVSDIGFSVMIGQDWPHDKAGKRGRVQVNSSFILRAGRRLYLKQDNTSERLSFRPSGNEEALAQKFSSKKWRKITPFKEFPSSLPAAKFTSGDIDVTMNLDDPLNQNIDTVQNVLQELRTQIPPEIFDLSKIVCGTYVDSRLLVLRGVNGSALLFTRSFVDTDSSS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06533 677 SMART serkin_6 94 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06533 677 SUPERFAMILY Protein kinase-like (PK-like) 89 416 IPR011009 -
Mepo3g06533 677 Gene3D Transferase(Phosphotransferase) domain 1 230 406 - -
Mepo3g06533 677 Pfam Protein kinase domain 237 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06533 677 Pfam PAP_fibrillin 439 663 IPR006843 -
Mepo3g06533 677 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 402 650 - -
Mepo3g06533 677 ProSiteProfiles Protein kinase domain profile. 94 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06533 214 410 AGC Kinase Gene Family AT3G10540 27.434 9.70e-08 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Mepo3g06533 PAP_fibrillin 1.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06533 - - gmx:100809306 1115.91