Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06522 ATGACTTTTCATCAAGATAAATTTGTTAGATTTCAGGACTGGAGTTCAGAGGTTAACTCTCCCGGAATAATTCACGTAACGCAGTCAGGGAGAATTAAAACTACACTGAAATCAGTATCAAGCAAGTTTCAAAGGGGATTCGAATCTAGTTCTGAGAGGATAAAGGGATTTGCAAAAAAGCCTTTTAAATCTTTTTCACAAAGCAGTGCTCTTACTAGATGTTTTAGTTCTAGAAATAAAATTCTTGATCCGCAGGGTCCTTTTCTTCAAAAATGGAACAAAATTTTTGTGTTATCGTGTCTTATTGCTGTATCGATTGATCCTTTGTTCTTCTATATCCCTGTGATTGATGATGACAAGAAATGTCTTTCACGGGACAAAAAAATGGAAACTACGGCAACTGTTTTAAGGTCTTTCTCCGACATTTTTTATATTATTCATATAATTTTTCAATTTCGTACTGGATTTATTGCTCCCTCTTCTCGAGTATTTGGAAGAGGTGTGTTGGTTCAAGATGCTTGGGCAATAGCAAAGAGATATATGGCATCATATTTCTTAGTTGACATTCTTGCCGTTCTTCCGCTCCCACAGGTGGTTATTCTATTTATCATTCCGAAGATGAGAGGCTCCGAATCACTGAACACGAAAAACTTGCTGAAATTTATTGTATTCTTCCAATATGTGCCACGGTTTATACGAATAGCTCCACTATATAAAGAGGTTACAAGGACCTCTGGCATTCTCACTGAAACAGCATGGGCTGGAGCTGCATTCAATCTCTTTCTTTACATGCTTGCAAGTCACGTTCTTGGTGCCTTTTGGTACTTGTTTTCTATAGAAAGAGAAACCACATGCTGGCAAAGGGCTTGTCAAAAAAATACCACATGTATAAAGGCAGAATTGTATTGTGATGATCATCATGGATTGAGCACAATTACAACATTCCTGAATGCTTCATGCCCAATACAGAATCCAGATAAAAAACTCTTTGATTTTGGAATTTTCCTTGATGCCCTTCAATCTGGAGTTGTTGGGTCAATGGACTTTCCACAGAAGTTTTTTTATTGTTTTTGGTGGGGCCTAAAGAATTTGAGTTCTCTTGGCCAGAACCTGGCAACAAGTACCTTTGTTTGGGAAATCTGCTTTGCAATTTTCATTTCCATTGCTGGTTTGGTATTATTTGCATTCCTCATTGGAAATATGCAGACATATTTACAGTCAACAACTACGAGATTGGAGGAGATGAGGGTGAAAAGGAGAGACGCAGAACAGTGGATGTCGCATCGACTACTCCCTGACCACTTGAGAGAAAGAATCAGACGACATGAGCAATACAAATGGCAAGAAACTAGAGGTGTTGATGAAGACAATTTGATCCGTAATCTTCCCAAGGATTTAAGAAGGGACATTAAGCGTCATCTCTGCTTGGCTTTGCTGATGAGGGTGCCAATATTTGAGAAGATGGATGAGCAACTTTTGGATGCAGTGTGTGACTGTCTCAAACCAGTACTTTACACGAAAGAAAGCTGCATTGTTCGCGAAGGAGATCCTGTTGATGAGATGCTCTTCATAATGCGCGGAAAATTGTTGACCGTGACAACAAACGGTGGAAGAACAGGTTTCTTCAACTCTGAATACCTCAAGGCTGGTGACTTCTGTGGAGAGGAGCTTCTCACATGGGCATTAGATCCTCGTTCTGCATCCAACCTTCCCATCTCAACCAGGACTGTCCAAACTCTTTCAGAAGTGGAAGCATTTGCTCTAAAAGCTGAGGATTTGAAGTTTGTTGCATCTCAATTTCGGCGCCTTCACAGTAAGCAGCTTCGCCACACTTTCAGATTTTACTCGCAACAATGGCGTACATGGGCTGCATGTTTCATACAAGCAGCGTGGAGGCGGTATTGTAAAAAGAAGCTCGAAGAGTCTCTAAGGGAAGAGGAGAATAGGCTCCAAGATGCATTGGCCAAGGAAGGTGGTAGTTCACCTAGCCTAGGTGCCACAATATATGCTTCAAGGTTTGCTGCAAATGTCCTTCGAGCCATACGTAAAAATGGCTCAAGGAAGCCCAGGGTGCCAGAGAGACTACCTCCCATGATGCTCCAGAAGCCTACTGAACCAGATTTTACTGCTGAAGAGCAGTAG 2142 0.4113 MTFHQDKFVRFQDWSSEVNSPGIIHVTQSGRIKTTLKSVSSKFQRGFESSSERIKGFAKKPFKSFSQSSALTRCFSSRNKILDPQGPFLQKWNKIFVLSCLIAVSIDPLFFYIPVIDDDKKCLSRDKKMETTATVLRSFSDIFYIIHIIFQFRTGFIAPSSRVFGRGVLVQDAWAIAKRYMASYFLVDILAVLPLPQVVILFIIPKMRGSESLNTKNLLKFIVFFQYVPRFIRIAPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVLGAFWYLFSIERETTCWQRACQKNTTCIKAELYCDDHHGLSTITTFLNASCPIQNPDKKLFDFGIFLDALQSGVVGSMDFPQKFFYCFWWGLKNLSSLGQNLATSTFVWEICFAIFISIAGLVLFAFLIGNMQTYLQSTTTRLEEMRVKRRDAEQWMSHRLLPDHLRERIRRHEQYKWQETRGVDEDNLIRNLPKDLRRDIKRHLCLALLMRVPIFEKMDEQLLDAVCDCLKPVLYTKESCIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSEYLKAGDFCGEELLTWALDPRSASNLPISTRTVQTLSEVEAFALKAEDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYCKKKLEESLREEENRLQDALAKEGGSSPSLGATIYASRFAANVLRAIRKNGSRKPRVPERLPPMMLQKPTEPDFTAEEQ 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06522 713 Coils Coil 636 656 - -
Mepo3g06522 713 CDD CAP_ED 484 615 IPR000595 -
Mepo3g06522 713 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo3g06522 713 SMART cnmp_10 484 615 IPR000595 -
Mepo3g06522 713 Pfam Cyclic nucleotide-binding domain 504 595 IPR000595 -
Mepo3g06522 713 Gene3D - 95 408 - -
Mepo3g06522 713 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Mepo3g06522 713 Gene3D Helix hairpin bin 410 475 - -
Mepo3g06522 713 FunFam Cyclic nucleotide-gated ion channel 1 411 475 - -
Mepo3g06522 713 SUPERFAMILY cAMP-binding domain-like 413 606 IPR018490 -
Mepo3g06522 713 MobiDBLite consensus disorder prediction 684 713 - -
Mepo3g06522 713 ProSiteProfiles cAMP/cGMP binding motif profile. 484 568 IPR000595 -
Mepo3g06522 713 Gene3D Jelly Rolls 482 602 IPR014710 -
Mepo3g06522 713 FunFam Cyclic nucleotide-gated ion channel 1 482 600 - -
Mepo3g06522 713 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 64 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06522 Mepo-Chr3 79217417 79225958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06522 1 712 Ion Channels AT5G53130 78.581 0.0 1151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06522 K05391 - gmx:100815774 1228