LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06518	ATGATGGAGTGCAACAAAGATGAGGCAGTCAGGGCTAAAGAAATAGCGGAGAGGAAATTTTCTGAAAGGGAATATATTGGTGCAAAGAAGTTTGCTCTCAAGGCTAAAAATTTGTATGCTGATTTGGAGGATATTTCCCAGTTTTTGACTACTATTGATATTTATATATCTGCTGAGAACAAAGTAAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAGTCCCTTTGCTGATGAAGAGACTGTTAGAAAGCAGTACAGGAAACTGGCTCTCACCCTTCACCCTGACAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTCAGCTGGTTTCAGAGGCATGGAGTTTGTTATCAGATAAGACCAAGAGACTAGAATATAACCAGAAGAGGAGTTTGAAAGGCTTCCAACATACTACTCCAAACCGTGCTGGGCATCCATCAAATGTACCTAGTTCAAATGGTTATTATCATTTTAAGAAGAATGCAACTTCAAATGTGAGGACTGGGAATCATAATGCTCGGGCTCCTGCCACTTCTGCCCCTCCACAGAAAAAGGCTGAAACCTTTTGGACTATCTGTAATAAGTGCAGGACACATTATGAATATCTCAGAGTTTATTTGAATCACACTCTTCTATGTCCCAACTGTAATGAAGCTTTTGTAGCCATAGAGAGGAGTCCTCCTCCCAATGTTTTTAAGCCATCAAGTTTGCCCTCCCATCAACAGCACCAGAATTCACGACGTCATCCTGGAAGTAATAATTCAAACCTTCAGTGGGGTTCCCACTCCAGAATGGCTGGTTTTGGTAGCACTGATGGATCGTCGTCTGTTGCCGCTCAAGCTGCAAGTGTCGTGCAAAAGGCAAGTGAGAAAGTGAAGAGAGAAGGAGCACCATCAATTGCTGAGTGGGAGAGGATTCAAATGTCTAAGAAGGCTGATGGTTCTATGAAGAAAAGGAAGGCAGATGATATTCGCGTTAATGGCTTTCCAGGATATATGGCAAATCATTTTGCTACGGGATCTGGAGCAGCAGGTTTGGGCAGTTTCTCTGGATCAGGAAAGGCTAACTTGGAAAAAGAAAGGACTTATGGTTTTTCAGGTTTTGGAGGCAAACATTACAGCACACGAGAGTTGTCATTGTTTGAGTTACGAAACATGTTGATGGATAAGGCACGGAATGAAGTTAGTAAAAAACTTGAAGAATGGAGGTTAACGGCTGAAGCTAAGATTGTCAACAAGAATAAGAGACAGAAGAACATATTCAATGACAAAACAACTGGTTCAGAGAAGTATGGAGAGTCCAATGTTAATGGTAACAAGCATTTTTCTATTGATTCTTTACCTGTCACGTCTGATGGTACAGTTAAGAAGAGCCAAGCCTATGTTACAATCAATGTTCCGGATCCTGATTTTCACAATTTTGACCTGGATAGAGCTGAAAGTTCCTTTGCAGAGGACCAGGTCTGGGCTGCTTATGACGATGATGATGGAATGCCTAGATATTATGCTAGAATTCACAAGGTGATCTCCACAAAGCCATTTAGAATGCGGATTAGTTGGCTTAACTCTCGAAGCAACAGTGAATTGGGCCCAATAGATTGGGTAGGTTCTGGTTTTTATAAAACTTGTGGGGATTTCAGGACTGGCAAGCATGAAGTATCCGAATCATTAAATTCATTTTCACACAAGGTTAGGTGGGCAAAAGGCACCAGAGGAGTTGTCCGCATCTTTCCAGGTAAGGGGGAAGTCTGGGCACTTTATAGAAACTGGTCTCCTGATTGGAATGAACATACTCCAGATGAAGTGATACACAAGTATGACATGGTGGAAGTGCTTGATGATTTCAGTGAAGAGCAAGGTATATTAGTTACTCCCCTTGTTAAGTTTCCTGGCTTTAGGACAGTATTTCGAAGGCACCAGGACCAGAATGAGGTTAGGAGGATTCCTAAAGAGGAGATGTTTCGATTCTCTCATCAGGTTCCTAATCACTTGCTCAGTGGCCAGGAAGCTCATAACGCTCCAATAGGTTGCCGAGAGTTGGATCCAGCAGCTACTCCTTTAGACCTCCTTCAGATAGCAACAGAAGCTAATGAGGCAGCAGGTAATGTTTAG	2115	0.4232	MMECNKDEAVRAKEIAERKFSEREYIGAKKFALKAKNLYADLEDISQFLTTIDIYISAENKVSGEMDWYGILGVSPFADEETVRKQYRKLALTLHPDKNKSLGAEGAFQLVSEAWSLLSDKTKRLEYNQKRSLKGFQHTTPNRAGHPSNVPSSNGYYHFKKNATSNVRTGNHNARAPATSAPPQKKAETFWTICNKCRTHYEYLRVYLNHTLLCPNCNEAFVAIERSPPPNVFKPSSLPSHQQHQNSRRHPGSNNSNLQWGSHSRMAGFGSTDGSSSVAAQAASVVQKASEKVKREGAPSIAEWERIQMSKKADGSMKKRKADDIRVNGFPGYMANHFATGSGAAGLGSFSGSGKANLEKERTYGFSGFGGKHYSTRELSLFELRNMLMDKARNEVSKKLEEWRLTAEAKIVNKNKRQKNIFNDKTTGSEKYGESNVNGNKHFSIDSLPVTSDGTVKKSQAYVTINVPDPDFHNFDLDRAESSFAEDQVWAAYDDDDGMPRYYARIHKVISTKPFRMRISWLNSRSNSELGPIDWVGSGFYKTCGDFRTGKHEVSESLNSFSHKVRWAKGTRGVVRIFPGKGEVWALYRNWSPDWNEHTPDEVIHKYDMVEVLDDFSEEQGILVTPLVKFPGFRTVFRRHQDQNEVRRIPKEEMFRFSHQVPNHLLSGQEAHNAPIGCRELDPAATPLDLLQIATEANEAAGNV	704

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06518	704	MobiDBLite	consensus disorder prediction	134	153	-	-
	Mepo3g06518	704	ProSitePatterns	Nt-dnaJ domain signature.	108	127	IPR018253	-
	Mepo3g06518	704	MobiDBLite	consensus disorder prediction	236	273	-	-
	Mepo3g06518	704	Gene3D	DnaJ domain	64	176	IPR036869	-
	Mepo3g06518	704	Pfam	DnaJ domain	67	128	IPR001623	-
	Mepo3g06518	704	SMART	dnaj_3	66	123	IPR001623	-
	Mepo3g06518	704	ProSiteProfiles	dnaJ domain profile.	67	131	IPR001623	-
	Mepo3g06518	704	PANTHER	BNAC03G44070D PROTEIN	2	687	-	-
	Mepo3g06518	704	CDD	DnaJ	67	120	IPR001623	-
	Mepo3g06518	704	PRINTS	DnaJ domain signature	69	87	IPR001623	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g06518	Mepo-Chr3	79193296	79197818	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g06518	5	229	SUVH1 or 3-interacting DNAJ domain-containing protein superfamily	AT2G01710	31.760	5.90e-29	117

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g06518	-		-	cam:101501612	1275

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