Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06517 ATGAAACATATGATTTTTCTGCTTGTCACTTTCAAGATTATAAAGAAGAAGCTGACAAAGCTACGTGAGAGAATGGGGTTTCAAACAGCACATAACACTAAGCGGATATCACAACCTGATTTGAAGGCAAAGGAAGACTCGTGCGATGGTCTAATTCCAAGGCCACTAAACTTGACTCATCGTAATCTAACCAATGCCAATTTCACTCCCTCTGGCTATGATTCGTGGCTGGTAAAGCACCCTTCTGCATTGAGCTCGTTTGATAGATTGATGAAAGCTGCCATTGGGAAAAGGATCGTCGTATTTTTAGATTATGATGGTACCTTATCACCCATTGTAAATGACCCTGATCGTGCTTTCATGTCTGATGAGATGCGTGCAGCAGTATCTGACGTTGCTACTTATTTTCCAACAGCAATAATTAGTGGAAGAAGTAGAGAGAAGGTAAAAGATTTTGTGAAGTTAAATAATTTATATTATGCTGGGAGTCATGGTATGGACATAATGGCACCATCAGGGCCAATTAGATCTTCTGACGGCAACCAGTGCTACAACAACACTCTTGATACAAATGGCAATATTAATGAAGTTCCATTTCAACCTGCCAAGAAGTTTTTGCCTGCAATTCAAGAGATATTAAGAAAATTGGAGAATGTAATAAAGGACATAGAAGGTGCAAAAATAGAAAACAACAGATTCTGCATCTCTGTACATTTCAGGCAGGTTCATGAAAAGGATTATAACAAATTGGAAGAGAAAGTGAAGTCTGTGCTTGGAAATAATCCACTGTTCTGCTTGACTGAGGGTAAAAAGGTTATGGAAATAAGGCCATCAATAGAATGGAACAAAGGAAATGCTGTTGAATATTTTCTTGACACATTAGGATTAAGCAGTTCCAGCAATTTCCTTCCTGTGTATATTGGTGATGATAAAACTGATGAAGATGCTTTTAAGGTTATAAAAAGAACAGGGCAAGGTTATCCGATTATAGTGTCTTCGACTCCAAGAGAAACAGATGCTTTCTACTCTTTGCGTGACCCATCAGAAGTACTAATCTTCTTGTCAAGGCTAGCAAAATGGAGAAAGGAATAG 1092 0.3828 MKHMIFLLVTFKIIKKKLTKLRERMGFQTAHNTKRISQPDLKAKEDSCDGLIPRPLNLTHRNLTNANFTPSGYDSWLVKHPSALSSFDRLMKAAIGKRIVVFLDYDGTLSPIVNDPDRAFMSDEMRAAVSDVATYFPTAIISGRSREKVKDFVKLNNLYYAGSHGMDIMAPSGPIRSSDGNQCYNNTLDTNGNINEVPFQPAKKFLPAIQEILRKLENVIKDIEGAKIENNRFCISVHFRQVHEKDYNKLEEKVKSVLGNNPLFCLTEGKKVMEIRPSIEWNKGNAVEYFLDTLGLSSSSNFLPVYIGDDKTDEDAFKVIKRTGQGYPIIVSSTPRETDAFYSLRDPSEVLIFLSRLAKWRKE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06517 363 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 32 362 IPR044651 GO:0004805|GO:0005992
Mepo3g06517 363 CDD HAD_TPP 100 350 - -
Mepo3g06517 363 FunFam Trehalose 6-phosphate phosphatase 207 363 - -
Mepo3g06517 363 NCBIfam HAD-IIB family hydrolase 101 323 IPR006379 -
Mepo3g06517 363 Coils Coil 240 260 - -
Mepo3g06517 363 Pfam Trehalose-phosphatase 102 348 IPR003337 GO:0003824|GO:0005992
Mepo3g06517 363 SUPERFAMILY HAD-like 100 360 IPR036412 -
Mepo3g06517 363 FunFam Trehalose 6-phosphate phosphatase 99 185 - -
Mepo3g06517 363 NCBIfam trehalose-phosphatase 96 359 IPR003337 GO:0003824|GO:0005992
Mepo3g06517 363 Coils Coil 209 229 - -
Mepo3g06517 363 Gene3D - 194 363 IPR023214 -
Mepo3g06517 363 Gene3D - 99 180 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06517 Mepo-Chr3 79166237 79170202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06517 97 358 Trehalose Biosynthesis Gene Families AT1G70290 27.240 1.02e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06517 K01087 - gmx:100809194 523.857