LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06507	ATGGGAGATTCAAAGAACTTAATAGATGAGCTACTACAAGGATTGGAGTTGGCAAGACAGCTTCAAATCTATCTCAACGTGTCTTCTTCCTCTAATGAAACACGTGAGATTTTGATTCAGAAAATCATATCCACATTTGAAAAGGCACTTGAAATGGTTAACCGTAAAAGACATGTTAATATGGGTGAATCTTCACAACAACAATACCCCTCAGCCTCAGGAACACTTGCCATCCGAATATCAGATTCGCCACCTTTGAGCTGTAGTCCACGAAGTGAAGACTCCGACAGAGATTTTAACCGTGATCATAATGCTTCCAGAAAAAGGAACACTCTACCAATTAGATGGACAAAACATATTCGAGTTGAACCAGGAATGGCAATGGAAGGTCCTCTTGATGATGGGTATAGTTGGAGAAAATATGGCCAGAAAGACATCCTTGGAGCCGTGCATCCAAGAGGCTATTACAGATGCACTCATAGAAACGTTCTAGGATGTTTGGCAACAAAGCAAGTACAAAGATCTGATGAAGACCCAACTATCTTTGAAATCACATACCGAGGAAACCACACATGCACAATTGCTTCCAATGTGGTTGGTCCAACAATAAATAATCCATTCCAAACTCAAGAAACAAATATTGCTAACACAAACCCTCAAAGCCTGGATCAACAAAAACCACCAAATGAACAACTTTTGAACAACCTACGAACAGGTCTAAGAGTTCAAACTGAGAACCTAGATTTCCTAAACCAATCATTTGTTCCACTTGAAAACCATGTACTTGAAAGTAGCTTTGCTGAAAACTTCAATTCTCCTTCATATGTTTCGCCTGCGAATTCAGGAATAAGTCACTTCTCGGTTTCTCCAACTCCAAGTGTGTTCCCAAATATGGCAAGTGAGATTATTCCACCAGCTACTTCTGCTGCAACCACTCCAACGGCGTCTATGGAGTTTCCGTTTGATCAATTTGAATTTGATGGCCAAAACTTCACATTCCACAACTCACGATTTTTCTCTTAA	1023	0.4008	MGDSKNLIDELLQGLELARQLQIYLNVSSSSNETREILIQKIISTFEKALEMVNRKRHVNMGESSQQQYPSASGTLAIRISDSPPLSCSPRSEDSDRDFNRDHNASRKRNTLPIRWTKHIRVEPGMAMEGPLDDGYSWRKYGQKDILGAVHPRGYYRCTHRNVLGCLATKQVQRSDEDPTIFEITYRGNHTCTIASNVVGPTINNPFQTQETNIANTNPQSLDQQKPPNEQLLNNLRTGLRVQTENLDFLNQSFVPLENHVLESSFAENFNSPSYVSPANSGISHFSVSPTPSVFPNMASEIIPPATSAATTPTASMEFPFDQFEFDGQNFTFHNSRFFS	340

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06507	340	PANTHER	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	3	280	IPR044810	GO:0003700
	Mepo3g06507	340	FunFam	WRKY transcription factor 53	118	195	-	-
	Mepo3g06507	340	SUPERFAMILY	WRKY DNA-binding domain	130	194	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g06507	340	MobiDBLite	consensus disorder prediction	91	106	-	-
	Mepo3g06507	340	Pfam	WRKY DNA -binding domain	133	192	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g06507	340	Gene3D	WRKY domain	120	195	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g06507	340	SMART	WRKY_cls	132	194	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g06507	340	ProSiteProfiles	WRKY domain profile.	127	195	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Mepo3g06507	340	MobiDBLite	consensus disorder prediction	80	106	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g06507	Mepo-Chr3	79077413	79079421	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g06507	3	248	WRKY Transcription Factor Family	AT4G23810	37.407	8.64e-48	162

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Mepo3g06507		WRKY	4.6e-27	CL0274