Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06494 ATGTCAAACAATGCATTAAATTTTCTTATCTTGTTTCTCACTATCTCCTTGTTTCCATTCATTTCTTCTCTAAACCAAGAAGGTCTCTCTCTACTTTCATGGCTTTCAACTTTCAACTCCTCAAACTCTGTCCCTACCACTACTTTCTCATCATGGGATCCAAGTCACAAAAATCCTTGCAGATGGGATTATATAAAATGTTCTGCAGAAGAGTTTGTTGAAGAGATCGTAATAACATCGATCGATCTTCATAGCGGATTCCCTGCACAGTTTCTTTCTTTTAACCACCTTACAACTCTTGTCATCTCAAATGGAAATCTCACAGGTGAGATTCCAAGTTCAGTTGGAAACTTGTCATCTCTAGTTACTCTTGATCTTAGCTACAATACTTTAACAGGAACTATACCAAAAGAAATAGGAAAGTTATCTGAACTGAGATGGTTATCTTTGAATTCGAATTCGTTGCACGGTGGGATTCCAACCACAATTGGTAACTGTTCAAAGCTTCAGCAGCTAGCACTGTTTGACAACCAGCTCTCCGGTATGATTCCGGGAGAAATAGGACAGTTGAAGGCTCTTGAATCGCTGAGAGCCGGTGGAAACCAAGGTATTTTCGGCGAAATTCCAATGCAGATATCAGATTGTAAGGCTTTGGTTTTTCTAGGACTTGCAGTTACTGGAATTTCTGGTGAGATTCCGGCAAGCATAGGAGAGCTTCAAAATCTCAAGACACTTTCAGTCTACACAGCTCATCTCACAGGTCAAATTCCACTGGAGATTCAGAACTGTTCTTCTTTGGAAGATTTGTTTCTGTATGAAAATCAGCTTTCTGGAAACATTCTTTATGAATTAGGTTCCATGCAAAGCCTCAAGAGAGTATTGCTGTGGCAGAACAATTTCACTGGAACCATTCCAGAAAGTCTTGGAAACTGTACAAATCTAAAGGTTATTGATTTTTCTTTGAATTCTCTGGTTGGTCAGTTACCTTTGTCTCTCAGTAATCTACTCTCATTGGAGGAACTTCTTGTGTCTGATAATAACATTTATGGAGAAATACCTTCATATATTGGCAATTTTTCCATGCTGAATCAACTTGAATTAGATAATAACAAATTCACTGGAGAGATTCCACGTGTTATGGGGAACTTGAAGGAACTCACTCTCTTCTATGCTTGGCAGAATCAACTTCATGGAAGTATACCAACAGAATTATCTAACTGTGAGAAACTTGAAGCAGTTGATCTTTCACACAATTTCCTCACTGGTCCAATTCCAAATTTTCTCTTTCATCTACAGAATTTAACTCAGTTGTTGCTGATATCAAACAGGCTTTCAGGCCAAATTCCACCGGATATCGGCAGGTGCACCAGCTTGATCAGGTTAAGACTTGGATCAAACAACTTTACTGGTCAAATTCCGCAAGAAATAGGCCTTTTAAGAAGTTTGAGCTTCCTAGAGTTGTCAGATAATAACCTTAGTGGAGGTATTCCTTATGAGATAGGTAACTGTGCTCATTTAGAAATGCTTGACTTGCATAAAAATGAGCTTCAAGGAACCATTCCTTCCTCATTAAAGTTATTAGTTGATCTTAATGTGTTGGATCTTTCTTCAAACAGAATCACCGGAAGCATTCCCAAGAGTTTTGGCAAGCTTACATCGCTAAATAAGTTGATTTTAAGCGGAAACCTTATCACCGGTTTGATCCCTCAGTCATTGGAACTATGTAAGGATTTGCAGTTGTTGGATTTAAGTAACAATAAGCTCATAGGTTCTATTCCCAATGAGATTGGTTACTTGCAAGGATTGGATATTCTTTTGAACTTGAGTTGGAATTCTCTTACTGGTCCCATTCCAAAGACTTTTTCAAATCTCTCAAAACTTTCAATCTTGGACCTATCTTACAACAAGCTCACAGGTACTCTCATAGTACTTGGTAATCTTGACAATCTTGTGTCTCTAAATGTTTCTTACAATAGATTTACTGGTACTCTTCCTGACACAAAATTCTTCCAAGATCTACCTTCTGCTGCATTTGCCGGTAACCCTGACCTTTGCATTAACAAGTGTCATACAAGTGGAAATCTCCGAGGAAACAAGTCAATGAGAAATATTATTATCTACACTTTCCTTGGTATTATCTTAACTTCTGCTGTTGTCACCTGTGGAGTTATTTTAGCATTAAGGATTCAAGGGGACAATTATTATGGGAGCAATAGTTTTGAGGAAGTGGAAATGGAATGGTCTTTCACTCCATTCCAAAAGCTTAACTTCAACATCAATGACATTGTCACAAAGTTGTCGGATTCAAACATAGTCGGAAAGGGCGTCTCGGGCGTTGTTTATCGTGTAGAGACTCCAACAAAACAGCTTATTGCAGTTAAGAAGCTATGGCCAGTAAAGAATGAAGAACCACCAGAGAGAGATTTGTTTACAGCAGAAGTTCAGACGCTTGGATCGATACGGCATAAGAATATAGTGAGACTTTTAGGATGCTGCGACAACGGAAGAACTAAAATGCTCTTGTTTGATTACATATGCAATGGTAGTTTGTTTGGATTGCTCCATGAAAAGAGAATGTTCTTGGATTGGGATGCAAGGTATAAGATTATACTTGGAACAGCTCATGGTTTAGAATATCTTCATCATGATTGTATCCCTCCAATCGTCCATCGCGACGTTAAGGCTAACAACATCTTGGTAGGCCAACAGTTTGAAGCTTTTCTTGCAGATTTTGGCCTTGCAAAATTGGTCATTTCCTCAGAGTGTGCAAGAGCCTCGCACGTAGTTGCAGGTTCTTATGGATACATAGCTCCGGAATATGGATACAGTTTAAGGATCACAGAGAAGAGTGATGTGTACAGCTATGGTGTTGTGCTCCTTGAGATGTTAACTGGAATGGAACCAACTGATAACAGGATTCCAGAGGGTGCTCACATTGTAACATGGGTTATCAGTGAAATCAGAGAGAAGAAAAGAGAATTCACATGTATTATTGATCAGCAATTATTAATACAGTGTGGAACAAAAACACCAGAGATGCTTCAAGTACTAGGTGTAGCTCTTCTCTGTGTGAATCCATCACCAGAAGAAAGACCTACAATGAAAGATGTAACAGCAATGCTCAAAGAGATTAGGCATGAAAATGATGATTTGGATAAACCAAATAAAGGCATGGTTGTTACCAATCCAAAAGCAGCAGTTCATTGTTCCAGTTTCTCAAGATCATGTGAACTTTTGATAGAATCATCATCATCTTCATAG 3261 0.3861 MSNNALNFLILFLTISLFPFISSLNQEGLSLLSWLSTFNSSNSVPTTTFSSWDPSHKNPCRWDYIKCSAEEFVEEIVITSIDLHSGFPAQFLSFNHLTTLVISNGNLTGEIPSSVGNLSSLVTLDLSYNTLTGTIPKEIGKLSELRWLSLNSNSLHGGIPTTIGNCSKLQQLALFDNQLSGMIPGEIGQLKALESLRAGGNQGIFGEIPMQISDCKALVFLGLAVTGISGEIPASIGELQNLKTLSVYTAHLTGQIPLEIQNCSSLEDLFLYENQLSGNILYELGSMQSLKRVLLWQNNFTGTIPESLGNCTNLKVIDFSLNSLVGQLPLSLSNLLSLEELLVSDNNIYGEIPSYIGNFSMLNQLELDNNKFTGEIPRVMGNLKELTLFYAWQNQLHGSIPTELSNCEKLEAVDLSHNFLTGPIPNFLFHLQNLTQLLLISNRLSGQIPPDIGRCTSLIRLRLGSNNFTGQIPQEIGLLRSLSFLELSDNNLSGGIPYEIGNCAHLEMLDLHKNELQGTIPSSLKLLVDLNVLDLSSNRITGSIPKSFGKLTSLNKLILSGNLITGLIPQSLELCKDLQLLDLSNNKLIGSIPNEIGYLQGLDILLNLSWNSLTGPIPKTFSNLSKLSILDLSYNKLTGTLIVLGNLDNLVSLNVSYNRFTGTLPDTKFFQDLPSAAFAGNPDLCINKCHTSGNLRGNKSMRNIIIYTFLGIILTSAVVTCGVILALRIQGDNYYGSNSFEEVEMEWSFTPFQKLNFNINDIVTKLSDSNIVGKGVSGVVYRVETPTKQLIAVKKLWPVKNEEPPERDLFTAEVQTLGSIRHKNIVRLLGCCDNGRTKMLLFDYICNGSLFGLLHEKRMFLDWDARYKIILGTAHGLEYLHHDCIPPIVHRDVKANNILVGQQFEAFLADFGLAKLVISSECARASHVVAGSYGYIAPEYGYSLRITEKSDVYSYGVVLLEMLTGMEPTDNRIPEGAHIVTWVISEIREKKREFTCIIDQQLLIQCGTKTPEMLQVLGVALLCVNPSPEERPTMKDVTAMLKEIRHENDDLDKPNKGMVVTNPKAAVHCSSFSRSCELLIESSSSS 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06494 1086 SUPERFAMILY L domain-like 73 395 - -
Mepo3g06494 1086 SMART LRR_typ_2 118 141 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 431 455 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 287 311 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 142 166 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 335 359 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 551 574 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 527 550 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 647 680 IPR003591 -
Mepo3g06494 1086 SMART LRR_typ_2 479 503 IPR003591 -
Mepo3g06494 1086 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 202 327 - -
Mepo3g06494 1086 Gene3D Phosphorylase Kinase; domain 1 735 844 - -
Mepo3g06494 1086 ProSiteProfiles Leucine-rich repeat profile. 577 599 IPR001611 GO:0005515
Mepo3g06494 1086 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 24 201 - -
Mepo3g06494 1086 ProSitePatterns Serine/Threonine protein kinases active-site signature. 888 900 IPR008271 GO:0004672|GO:0006468
Mepo3g06494 1086 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 409 693 - -
Mepo3g06494 1086 Gene3D Ribonuclease Inhibitor 431 696 IPR032675 -
Mepo3g06494 1086 Pfam Leucine rich repeat N-terminal domain 25 68 IPR013210 -
Mepo3g06494 1086 SMART serkin_6 766 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06494 1086 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 845 1058 - -
Mepo3g06494 1086 Pfam Leucine Rich Repeat 409 430 IPR001611 GO:0005515
Mepo3g06494 1086 Gene3D Ribonuclease Inhibitor 364 430 IPR032675 -
Mepo3g06494 1086 PRINTS Leucine-rich repeat signature 624 637 - -
Mepo3g06494 1086 PRINTS Leucine-rich repeat signature 121 134 - -
Mepo3g06494 1086 SUPERFAMILY RNI-like 323 665 - -
Mepo3g06494 1086 Pfam Leucine rich repeat 530 588 IPR001611 GO:0005515
Mepo3g06494 1086 Pfam Leucine rich repeat 96 155 IPR001611 GO:0005515
Mepo3g06494 1086 Pfam Leucine rich repeat 606 660 IPR001611 GO:0005515
Mepo3g06494 1086 Pfam Protein kinase domain 769 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06494 1086 ProSitePatterns Protein kinases ATP-binding region signature. 772 800 IPR017441 GO:0005524
Mepo3g06494 1086 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 742 844 - -
Mepo3g06494 1086 PANTHER RECEPTOR-LIKE PROTEIN 55 434 1046 - -
Mepo3g06494 1086 SUPERFAMILY Protein kinase-like (PK-like) 753 1041 IPR011009 -
Mepo3g06494 1086 Gene3D Ribonuclease Inhibitor 283 363 IPR032675 -
Mepo3g06494 1086 ProSiteProfiles Protein kinase domain profile. 766 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06494 1086 Gene3D Transferase(Phosphotransferase) domain 1 845 1063 - -
Mepo3g06494 1086 Gene3D Ribonuclease Inhibitor 182 282 IPR032675 -
Mepo3g06494 1086 Gene3D Ribonuclease Inhibitor 25 181 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06494 Mepo-Chr3 78923946 78927898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06494 23 1077 Receptor kinase-like Gene Family AT5G56040 46.740 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo3g06494 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06494 - - gmx:100807225 1733.77