Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06487 ATGGGTAGACCAATTCGAGCATACCTTCGGATCGACCATGCAGTTGGCTCGGCAAGAACCGGTCAAACTCGATGCTTCCTCGAGACTACTATTAGGGTAGAAGGGTACCCAATTGAGGATTTCATTGTGAAGTTGCCAGGCCAACCTAAGGTTGAATTCAAACAATATGCTGGCTATATTGATATAGATGTAAAGCATGGGAGAAGCCTCTTCTATTATTTTGTTGAGGCTGATCATGACCCTCACAAAAAGCCCCTCACCCTTTGGCTCAATGGAGGTCCAGGATGTTCATCAATTGGAGGAGGTGCCTTTACGGAATTGGGTCCATTTTATCCTACCGGTGATGGACGTGGTTTACGAAGAAATAAAAAATCTTGGAATAGAGCTTCCAATCTCCTTTTTGTGGAGTCTCCCGCTGGAGTTGGTTGGTCATACTCAAATACAACTTTCGATTATAATTATGATGACGCCTCCACGGCTAATGATACGCTTTTGTTCATGTTAAAATGGTACGAGAAGTTTCCTTCCTATAGACCAAGGGGGTTGTTTCTGACAGGAGAAAGCTATGCAGGACATTTCATACCTCACTTAGCTAATGCTATTCTTGATTATAATGCTCATCATTCAACTGGTTTCAAATTCAATATAAAAGGAGTCGCAATTGGAAATCCACTTTTGCAAATTAATAGTGTTACGCAAACAACATATGAGTATTATTGGTCACATGGAATGATTTCCGATGAAATAGGCCTTACCATTATGAATGATTGCAATTTTGATGCATCTTATGATAACTTATCTAAATCATGTAAAGATGCCATGGTTGATGCTCAAGATATTGTGAGCGATTATATAGACAACTATGATGTGATTCTTGATGTTTGTTATCCATCCATAGCTGAACAAGAATTGAGATTAAAAAAAATGGCTACTAAAATAAGTTTAAGTGTAGATATTTGTATGGACTCTGAAATCTATTTTTATCTTAACCTTCTGGAGGTTCAGAAGGCTCTCCATGCTAACCGTACCAATTTGCCCTATCCATGGTCTATGTGTAGTGATGTTTTAAATTACAATGATGCAGATCACGATATCAATATGCTTCCGGTTCTCAAACGGATAGTTCAAAACCATATTCCAATATGGGTTTATAGCGGAGACCAAGATTCAGTTGTGCCATTACTAAGTTCTCGAAGACTCATTCGTGAACTAGCTCATGACCTGAATTTCAACATTACAGACTCATATAGAGTTTGGTTCCATAGAGGCCAGGTTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACTTTCGTCACCGTAAGAGGAGCAGGTCACATAGTACCTTATGCGCAACCTTCTAAAGCATTGCATCTATTCAGTTCCTTTGTACGTGGCAAAAGATTGCCAAAAACAACCCGACCTTAA 1428 0.3936 MGRPIRAYLRIDHAVGSARTGQTRCFLETTIRVEGYPIEDFIVKLPGQPKVEFKQYAGYIDIDVKHGRSLFYYFVEADHDPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRRNKKSWNRASNLLFVESPAGVGWSYSNTTFDYNYDDASTANDTLLFMLKWYEKFPSYRPRGLFLTGESYAGHFIPHLANAILDYNAHHSTGFKFNIKGVAIGNPLLQINSVTQTTYEYYWSHGMISDEIGLTIMNDCNFDASYDNLSKSCKDAMVDAQDIVSDYIDNYDVILDVCYPSIAEQELRLKKMATKISLSVDICMDSEIYFYLNLLEVQKALHANRTNLPYPWSMCSDVLNYNDADHDINMLPVLKRIVQNHIPIWVYSGDQDSVVPLLSSRRLIRELAHDLNFNITDSYRVWFHRGQVGGWVTEYGNLLTFVTVRGAGHIVPYAQPSKALHLFSSFVRGKRLPKTTRP 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06487 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Mepo3g06487 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Mepo3g06487 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Mepo3g06487 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 436 449 IPR001563 GO:0004185|GO:0006508
Mepo3g06487 475 Gene3D - 320 356 - -
Mepo3g06487 475 FunFam Carboxypeptidase 36 297 - -
Mepo3g06487 475 SUPERFAMILY alpha/beta-Hydrolases 40 469 IPR029058 -
Mepo3g06487 475 FunFam Carboxypeptidase 367 466 - -
Mepo3g06487 475 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Mepo3g06487 475 Gene3D - 367 466 - -
Mepo3g06487 475 Gene3D alpha/beta hydrolase 38 296 IPR029058 -
Mepo3g06487 475 Pfam Serine carboxypeptidase 47 466 IPR001563 GO:0004185|GO:0006508
Mepo3g06487 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 436 453 IPR033124 GO:0004185
Mepo3g06487 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 453 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06487 Mepo-Chr3 78852695 78860355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06487 327 469 Calmodulin-binding Proteins AT2G22960 28.671 4.35e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06487 K16297 - gmx:100815723 730.709