Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06485 ATGGGAAAGTGTTGGTTTGTTGGAGTGTTGTTTGTGGTGGCATATGGAAGCTTGTTGGTAACAACAATTGGGGTAGAAGGGTACCCAATTGAAGATCTAGTTGTGAAGCTACCAGGCCAACCCAAAGTTAAATTCAGTCAATATGCTGGTTATGTTGATATAGATATAAAACATGGGAGGAGTCTCTTCTATTATTTTGTTGAGGCTGACCATCTCCCTCACAAAAAGCCTCTCACCCTATGGCTCAATGGAGGTCCAGGATGTTCCTCTATCGGAGGAGGTGCTTTTACTGAATTGGGTCCATTTTATCCTTCTGGTGATGGACGCGGTCTACGAAGAAATTCAAAGTCCTGGAATACAGTTTCCAATCTCCTCTTTGTGGAGTCTCCCGCTGGAGTTGGTTGGTCATACTCAAATACAACTTCTGATTATAACATTGGTGACGCTTCTACAGCCAATGACATGCTTTTGTTCATGCTGAAATGGTACGAGAAGTTTCCTTCATACAAATCGAGGAAGTTGTTTCTTACCGGAGAAAGCTACGCAGGACATTACATACCTCAATTAGCCAATGCCATTCTTGATTATAATGCTCATTCATCCAGTTTCAAGTTCAACATAAAAGGAGTTGCCATTGGAAACCCACTTCTGAAATTGAATCGTGATACACAAGCAACATATGAATATTTCTGGTCACACGGAATGATTTCGGATGAAATTGGTCTTGCCATTAGGAATGATTGTGATTTTGATGATCATACCGATGCAACTACTCATAACGTATCTAAATCATGCAACGAAGCACTAAAGGTCACTAGGAAAATTGTGAGCGAGTATGTAGACAACTATGATGTGATTCTTGATGTGTGTTATCCAGCTATAGCAGAACAAGAAATCAGATTGAAAAAGATGGCTACTAAAATAAGTTTAAGTGTAGACGTATATATAGATTATGAAAGCTTTAATTACCTCAACCTTCCCGAGGTTCAGAAGGCTCTCCATGCCAACCGTACTTATCTGCCGTATCCATGGGGCATGTGCAGTGATGTTTTGAATTACAGTAAAACAGATCCTTACACTGATATGCTTCCGATTCTCAAGCGGATAGTTCAAAATCATATTCCAATATGGGTTTACAGTGGAGACCAAGATTCAGTTGTTCCATTACTAGGTTCTCGAACACTCATTCGTGAACTAGCTCATGACCTGAAATTCAAGATTACAGACTCATATAGAGTCTGGTTCCACAAAGGACAGGCTGGAGGTTGGGTAACTGAGTATGGAAATTTGTTGACTTTCGCCACCGTAAGAGGAGCAGGTCACATGGTGCCATATGGACAACCTTCTAGGGCACTACATCTATTCAGCTCCTTTGTGCACGGAAAGAGATTGCCAAACTCTGCTAAACCCTCAATTGGAGAATGA 1425 0.4098 MGKCWFVGVLFVVAYGSLLVTTIGVEGYPIEDLVVKLPGQPKVKFSQYAGYVDIDIKHGRSLFYYFVEADHLPHKKPLTLWLNGGPGCSSIGGGAFTELGPFYPSGDGRGLRRNSKSWNTVSNLLFVESPAGVGWSYSNTTSDYNIGDASTANDMLLFMLKWYEKFPSYKSRKLFLTGESYAGHYIPQLANAILDYNAHSSSFKFNIKGVAIGNPLLKLNRDTQATYEYFWSHGMISDEIGLAIRNDCDFDDHTDATTHNVSKSCNEALKVTRKIVSEYVDNYDVILDVCYPAIAEQEIRLKKMATKISLSVDVYIDYESFNYLNLPEVQKALHANRTYLPYPWGMCSDVLNYSKTDPYTDMLPILKRIVQNHIPIWVYSGDQDSVVPLLGSRTLIRELAHDLKFKITDSYRVWFHKGQAGGWVTEYGNLLTFATVRGAGHMVPYGQPSRALHLFSSFVHGKRLPNSAKPSIGE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06485 474 Pfam Serine carboxypeptidase 39 461 IPR001563 GO:0004185|GO:0006508
Mepo3g06485 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 187 IPR001563 GO:0004185|GO:0006508
Mepo3g06485 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 137 IPR001563 GO:0004185|GO:0006508
Mepo3g06485 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 126 IPR001563 GO:0004185|GO:0006508
Mepo3g06485 474 PRINTS Carboxypeptidase C serine protease (S10) family signature 431 444 IPR001563 GO:0004185|GO:0006508
Mepo3g06485 474 FunFam Carboxypeptidase 362 461 - -
Mepo3g06485 474 SUPERFAMILY alpha/beta-Hydrolases 25 466 IPR029058 -
Mepo3g06485 474 ProSitePatterns Serine carboxypeptidases, serine active site. 176 183 IPR018202 GO:0004185
Mepo3g06485 474 Gene3D - 316 351 - -
Mepo3g06485 474 Gene3D - 362 461 - -
Mepo3g06485 474 FunFam Carboxypeptidase 28 292 - -
Mepo3g06485 474 ProSitePatterns Serine carboxypeptidases, histidine active site. 431 448 IPR033124 GO:0004185
Mepo3g06485 474 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 34 448 IPR001563 GO:0004185|GO:0006508
Mepo3g06485 474 Gene3D alpha/beta hydrolase 30 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06485 Mepo-Chr3 78832755 78836293 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06485 378 464 Calmodulin-binding Proteins AT2G22960 34.483 4.86e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06485 K16297 - gmx:100803335 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06485 3 78832755 78836293 Mepo3g06485 3 78832755 78836293 ECH