Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06462 ATGAATAGAGAGTTACAACAATTTGCAGCATCATCTTCATCTCATTTTTATAGCCGTTTTCCAAAACCATTCTCTTTACGTAAGAAAGTGCCATGGTGGTACCAAATACTCCATCCACGTTCAAAGTTTGTGGCAAAATGGAACGTAATATTCCTCTATGCTTGTCTCTTTGCTTTGTTTTTAGACCCTCTTTATTTCTATATTCCTATTACGGGAGACAAAGCGTGCATGCAAACAGATTTGGTTCTTGGTTTGTTAGTCACGTTCTCGCGAACCGTCGCAGATCTCTTCTTCTTGTTTCACGTGATTCTTAAGTTCAGAACTGCCTTCAATTCTCCAACCTCTCATGTTTATGGTCGTAAAGAACTTATCACTGATCCGGGTCAGATCGCCCGCCGATATATCAAGCATGATTTCATCATTGATCTTCTTGCCACCCTTCCTTTACCTCAGATAGTCATTTGGGTTGTGATTCCAGCGACAAAGAACTCAAATGCAGCTCATGTAAACCACACATTGTCCCTAATCGTTCTCATTCAGTTCATTCCTAGATGTTTTCAGATTTTTCCTTTACAACGCCGAATCTTGAAAACTAGTGGCCTTATAGCAAAAACTGCTTTGGCAGGGGCATTGTACAATCTTGGTTTCTACATGCTGGCCAGCCATGTTTTAGGAGCAACATGGTATGTGTCATCTATTCAGAGACAATATGAGTGTTGGAGAATAATGTGCAAGAAGGAAATGAACAGAACACATTCTCCTTCTTGTAATCCTTCTTTTCTTGATTGTAGCACACTTTCTAACAATGAACGTCAAGTTTGGTTCAGACGCACTAGAGTCCTCACAGCTTGTGATGCACTCAACGATAAAAATCACTTTCAGTTTGGAATGTTTGCTGATGCTTTTACTGATCATGTCTCTTCCTCAGGATTCATCCAAAAATATTTTTATTGCCTCTGGTGGGGTTTGAAAAATCTGAGTTCATATGGACAAAATCTTAAGACTAGCACTTACAGTGGTGAAACATTATTTTCAAGTTTCATATGCATAGCAGGTCTTATTCTGTTTGCACATCTCATTGGTAACATGCAGAATTATCTGCAATCTACAACTGCAAGACTTGAAGAGTGGAGACTTAGACAAAAAGATACAGAAGAATGGATGAATCATCGCCAACTTCCACCAGAACTACAAGAACGTGTTCGTCGCTTTGTTCAGTACAAATGGCTTGCTACTAGAGGTGTTGACGAAGAAGCCATTTTAAAATCCTTACCTGTTGATCTTCGTCGCCAGATTCAGAGGCATCTCTGTCTAGACATTGTTCGCCGGGTACCATTTTTCGGCCAAATGGATGATCAGCTTCTAGATGCTATATGCGAACGTTTACTATCATCGTTGAACACAAAAGGCTCATACATAGTTAGAGAAGGTGATCCAGTGAAAGAGATGCTTTTTATCATCAGAGGAAGTGTAGACAGTTCTACAACAGATGGTGGTAGATCAGGATTCTTCAATTCAATCACACTAAAACCAGGTGACTTTTGTGGTGAAGAATTGCTAACATGGGCTTTGATACCAGCATCTAGTCTAAACCTTCCATCATCTACAAGAACTGTTAAGACACTAAGTGAAGTAGAAGCATTTGCACTTAGAGCAGAAGATCTCAAATTTGTGTCAAGCCAGTTTAAGCGTCTTCATAGCAAGAAACTGCAACATGCTTTCAGATATTACTCTCATCAGTGGAGAGCTTGGGGGGCATCTTTTATACAAGCGGCGTGGCGGCGTCATAGGAAGAGACAATTGGCAATGAAATTGTTAGAGAAAGAGAATTTGTATTATGAAAATGTGATGGAGCTAGAGGATTATGAAGAGAGTGGTGGAGGAGAGAGTTCTATGGGATTGGAGGAAGATAATGCTAGTCATGGTTTTGGTGCTACATTTTTGGCTTCAAAATTTGCTGCAAATACTAAGAAAGGAGCAGTTAAAAAGGTGACTATGATCCCTGATAGTAGCAGTTTAAAGATGCCTAAGATGTTTAAGCCAACTATGCCTGATTTCTCAACATTTCAAGAAGATTAA 2079 0.3963 MNRELQQFAASSSSHFYSRFPKPFSLRKKVPWWYQILHPRSKFVAKWNVIFLYACLFALFLDPLYFYIPITGDKACMQTDLVLGLLVTFSRTVADLFFLFHVILKFRTAFNSPTSHVYGRKELITDPGQIARRYIKHDFIIDLLATLPLPQIVIWVVIPATKNSNAAHVNHTLSLIVLIQFIPRCFQIFPLQRRILKTSGLIAKTALAGALYNLGFYMLASHVLGATWYVSSIQRQYECWRIMCKKEMNRTHSPSCNPSFLDCSTLSNNERQVWFRRTRVLTACDALNDKNHFQFGMFADAFTDHVSSSGFIQKYFYCLWWGLKNLSSYGQNLKTSTYSGETLFSSFICIAGLILFAHLIGNMQNYLQSTTARLEEWRLRQKDTEEWMNHRQLPPELQERVRRFVQYKWLATRGVDEEAILKSLPVDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLLSSLNTKGSYIVREGDPVKEMLFIIRGSVDSSTTDGGRSGFFNSITLKPGDFCGEELLTWALIPASSLNLPSSTRTVKTLSEVEAFALRAEDLKFVSSQFKRLHSKKLQHAFRYYSHQWRAWGASFIQAAWRRHRKRQLAMKLLEKENLYYENVMELEDYEESGGGESSMGLEEDNASHGFGATFLASKFAANTKKGAVKKVTMIPDSSSLKMPKMFKPTMPDFSTFQED 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06462 692 Gene3D - 76 370 - -
Mepo3g06462 692 Pfam Ion transport protein 47 373 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo3g06462 692 ProSiteProfiles cAMP/cGMP binding motif profile. 446 520 IPR000595 -
Mepo3g06462 692 FunFam Cyclic nucleotide-gated ion channel 1 444 562 - -
Mepo3g06462 692 Gene3D Helix hairpin bin 372 437 - -
Mepo3g06462 692 SUPERFAMILY Voltage-gated potassium channels 39 368 - -
Mepo3g06462 692 SMART cnmp_10 446 574 IPR000595 -
Mepo3g06462 692 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 686 - -
Mepo3g06462 692 Gene3D Jelly Rolls 444 564 IPR014710 -
Mepo3g06462 692 Pfam Cyclic nucleotide-binding domain 469 556 IPR000595 -
Mepo3g06462 692 FunFam Cyclic nucleotide-gated ion channel 1 373 437 - -
Mepo3g06462 692 CDD CAP_ED 446 577 IPR000595 -
Mepo3g06462 692 SUPERFAMILY cAMP-binding domain-like 375 571 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06462 Mepo-Chr3 78583515 78586985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06462 35 686 Ion Channels AT3G48010 66.015 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06462 K05391 - gmx:100783672 1181.01