Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06460 ATGTTGACTGTGCTAACGGCAATAAGGGTAAGTCCTCCTTCTCCTTCTTGCATCATCGTTGCTTGTGATGCCACAAGGGACCGCAATGAGCACGATATTAAGCTTGTCATTGATCACATTCGTGCTAGGGGTATCATTCTCTCTTCCAGTGACAGATTGCTTGTGCTCTGCATCTTGCATAAGGTGTCTCACCCAATGGGATACCAGACATTAGCATGTCCTGAGTCTTTTGCCGGCACCAACTTTCGTGCAATGGAGGAAGAAGTCAGAAAAAAAGTGCATGTATATGCAAATGAGCTTTTATCATGTCTTGAGGATTTTGAAATCCAAGGGGTTACCATTGACATTCAAGTCACCGCAGGATTTCCAATTAGGCAGATTATCTTACAAGAGGTTAAAAACTATAATGCATCTTGGATTGTACTTGATAGATACCTTCGGCGCGACATGAGATTCCACCTTAACAAGATACCATGTAATGTAGCATTGGTTAAAGATGACTTGTCTGTGGATATATGGAAATCTCAAAATGCAAATGACAAAATTGCAGAAACAAAACCTGTGTATTCTTTGTCCAAGTTTGTATCATTATCAGATTGCCACAGCATGCAAGACATTGAGCAGTCTATTATCTCTTGCAAAAGTTATCCACATTCCTTAGCTTCTTCTGATAGCTCTGGTACTATTAAGAGCTATTCAATGCATTCATATGCCAATAGTTCATTACATTCTGGGTCTTCTTCTAAGCATGAAAGATCAGGTATAAGCATCAAAGGAGAACATAAACATCTCATGACTTCTCAAATTGGCCAAAAGCAAAATCAATGTGTGTTTCTACCAAAATCTTCAGGTGCACCAATTCTATGTGTTGGTTGTGGAATAAGGACAGAGTTATCCATCAAGGAGTCAAATAGGTTCACCTATTCTGAAATACAGCTTGCAACAAATGATTTTTCAAAGGATAACTTAATAGGTGAAGGTGGATATGGTCATGTATATAAGGGTGTTCTTAAAGATGGACAACAAATAGCTGCAAAAGTAAGGAAAGAAGAAAGTGCACAAGGGTTTTCTGAATTTCATTCTGAGGTTTATGTCTTGAGTTTTGCTAGACACAAGAATATAGTGATGCTGTTAGGTTACTGTTGCAAAGAAAATAAAAATATTCTCATATATGAATATATTTGCAATAAGTCTCTTCATTGGCATCTATTTGAAAATAGTGAAGCAGTTCTTGATTGGCCTCAAAGATATGGTATTGCACTTGGGATTGCAAAGGGATTGCGTTTTCTACATGAGGAATGTCGAGGTGGTCCTATCATTCATAGGGACATGAGACCAAGCAATATACTTCTCACTCATGATTTTGTTCCCATGCTAGCTGACTTTGGCCTTGCAAAGTGGAACACTGGTGATGATTCTCATCAAACAAGGATAATGGGAACATTTGGATATCTTGCTCCTGAGTATGCTGAAGATGGTATTGTTTCTGAAGGGACAGATGTGTATTCTTATGGTGTTACTATGTTACAGTTGATATCAGGACGCCAAGTGGCCAATTTAAATAATCCAGATCAGCAACAACAATCTCTCCGACAATGGGCTGAACCAATCATGGAGAAGTTGGCTTTACATGAACTGATTGATCCTCGTTTGGGTGAATCATATGACACTTATGAACTATACCTTATGGCTAAAGCAGCAAATTTCTGTATGCAAAGAAACCCTGAGATGCGTCCATCAATGAGAGAGGTTGTGCGATTTCTTGAGGGAGAAAGTTACCATTTCCATACTCTGGAAAGTCAAATTGTACCAAACCATAACACTTGA 1827 0.387 MLTVLTAIRVSPPSPSCIIVACDATRDRNEHDIKLVIDHIRARGIILSSSDRLLVLCILHKVSHPMGYQTLACPESFAGTNFRAMEEEVRKKVHVYANELLSCLEDFEIQGVTIDIQVTAGFPIRQIILQEVKNYNASWIVLDRYLRRDMRFHLNKIPCNVALVKDDLSVDIWKSQNANDKIAETKPVYSLSKFVSLSDCHSMQDIEQSIISCKSYPHSLASSDSSGTIKSYSMHSYANSSLHSGSSSKHERSGISIKGEHKHLMTSQIGQKQNQCVFLPKSSGAPILCVGCGIRTELSIKESNRFTYSEIQLATNDFSKDNLIGEGGYGHVYKGVLKDGQQIAAKVRKEESAQGFSEFHSEVYVLSFARHKNIVMLLGYCCKENKNILIYEYICNKSLHWHLFENSEAVLDWPQRYGIALGIAKGLRFLHEECRGGPIIHRDMRPSNILLTHDFVPMLADFGLAKWNTGDDSHQTRIMGTFGYLAPEYAEDGIVSEGTDVYSYGVTMLQLISGRQVANLNNPDQQQQSLRQWAEPIMEKLALHELIDPRLGESYDTYELYLMAKAANFCMQRNPEMRPSMREVVRFLEGESYHFHTLESQIVPNHNT 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06460 608 Pfam Protein kinase domain 319 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06460 608 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 394 597 - -
Mepo3g06460 608 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 162 592 - -
Mepo3g06460 608 Gene3D Transferase(Phosphotransferase) domain 1 395 601 - -
Mepo3g06460 608 CDD STKc_IRAK 324 590 - -
Mepo3g06460 608 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 291 393 - -
Mepo3g06460 608 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Mepo3g06460 608 Gene3D Phosphorylase Kinase; domain 1 292 393 - -
Mepo3g06460 608 ProSiteProfiles Protein kinase domain profile. 318 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06460 608 SUPERFAMILY Protein kinase-like (PK-like) 302 595 IPR011009 -
Mepo3g06460 608 ProSitePatterns Tyrosine protein kinases specific active-site signature. 439 451 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06460 Mepo-Chr3 78573422 78577295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06460 306 589 Trihelix Transcription Factor Family AT5G38560 45.017 1.71e-78 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mepo3g06460 Pkinase 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06460 - - vun:114163670 957.592