Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06432 ATGGAAACTGATGAAGGAATGGAAAATTCTGGTAACACTGAATGTGTTGAAGGAGTACGGTGTTTGAAACGGAAAGCCATTGATCATGGAAATGGTGTTGTTGAAGAAGGTAGGCATTCAGAAAGTGAAACTTTGAATGACGTGGCGGTGTTTGCGAATGGAAGTAGTGTTGCTGATGTGGCTGAGGTTTTGAAAAGTTTGAAAAATGGGGTGGGTAGAAATTGTGTTGCTGAAGAGGCTCGAGAATCAATAAGCGAAGCTGTGAATGATAGAACGGTGGTTGCAAATGGAAATTGTGTTACCGAAGAGGCTCGAGAATCGACAAGTGAAGCTGTGAATGATGGGGCGGTGAATGTGAATGGAAGTTGTGTTGCCAAAGAGACTCGAGAATTGATAAGTGAAGCTGTGAATGATGGGGCGGTATTTTCGAATGGAAATGGTGTTAATGAAGAGGTTGGAGTCTTGAAAAGTGAAGCTGTGAATGATGGGGTGGTGTTTTCGAATGGAAATGGTGTTACTGAAGACGCTGGAGTCTTGAAAAGCGAAGGCGTTAGCAATGGGGTGGCAAGTTCAGGTGGGTTTGATTCTGGTGATGGGGGCTCTGGTGGAGTGACGTGTCTTCGAACTTATAAGAGGCGAAAGTATGATAAGTCAAGTTCAAAAGGCAAAGCGCAGGAGGATTGTGGAAAATGCGCGGAAACTGCGAGTCATATAGCAGACCAGGTTGTGAAGGAACCCTTGGATGCAACTTTAGGCAATACTGCAGATGATTGTGCCCATAGACATTGGGGAAACGTGGTACTAAAACAGTTATACCAGTCATTAGGCAATAGCAATGGTGGCATAAAGGGGTGCATAGGGGAAGCACTAATTCGACATCAAAGTTGTGCCACTACAGGAACTTCTAAAATTGGCAAAGATGGACAAGAATTCTCTTCACAATTTGGTCGTTCATCTCATAGAACACGAACTGAAGCTAATGGGCATGCAAATGTCATGCAAAATGGATCTTCTAGTGAACCTCATGGCCATGGTGTGACTGAGATGTGTCAGCGTGTGCTCTGCAATTTATTAACCTCAGAAAAATTCAATTCATTATGCAAGACTTTATTTGATAAAGCAACGAAGCCGGAAAGTGTATTTGATTTTAGTGTCATAACCTTAAGGATGAAGCAGAAAGTCTATGAACAATCACCTGCACTTTTCTTGTCAGATATTCAACAGGTCTTTGGAAAGCTTCAAGATACATTTAAGGAAATTGTTGCTCTTTCTAACAGCCTTTCCAATATATCAGCAGATTCCTACTCTAAGCTGGTTGGAATTTCAGCGCAGAGGACATCTGAAGATGAAAAACAAGTGGAATTGGACTCTCACATGAAACCAGAGCAAACGGAAGAATGCGCTACCTATAAAGTTTGCTGTTGCAGTAGTTGTGGAGAAAGGGCAGATGGCACAGACTGTTTGGTCTGTGATTCATGTGAGAAGGTGTACCATTTGTCCTGTATTGAGCTTGCAGTTAATGAAATACCTCACAAAAGCTGGTATTGTGCTAATTGCACCACAATTGGCTTTGGTTCTCCGCATGAAAATTGTGTAGTATGCGCGAGGTTGAATGACACAAAGACGCCCAAGAAAATAATTGGTGAGGAAAGCCTCCCTACAAATGAGGAAACACTTGATGAATTTGATGATAATTCAAATGACAGCTATGATGGGATTCAAATATCTACAGGTGGAAGAGAAAAAGCCAGTTGCAAAGTGTGTGGAAATGAAGTCGAAATCAAAGGTGAAAAAATAAGAATATGTGGTCACCATTTTTGTCCAAGTAAATACTACCATGCAAGGTGTTTGACAAGCAAGCAATTAAATTCATATGGCTATTGGTGGTACTGCCCTTCTTGTTTATGCCAAGTTTGCCTCACCGATCAAGATGATTCACAGATTGTCCTCTGTGATGGCTGTGATCATGCATATCACATCTATTGCATGAAGCCTCCACTGGATTCTATTCCACAGGGGAAATGGTTCTGCAGAAAATGTGATGCTGGAATCAAGGCAATATCCCAAGCAAAAAAAGCGTATGAGAGTAACAAGCTGAGAACCGGTGAATGTGTTTCAAAGCCAAATGCTAATAACAACTGCAACAGTAAATTTGTAGAAGAATTGGAAAGTTGTGGTGGAATGGACATGCTTTTAACTGCGGCCAATTCTCTGAATTTTGAAGAGAATTTGGCCGAAAACCAGTTTGAGTAG 2253 0.4159 METDEGMENSGNTECVEGVRCLKRKAIDHGNGVVEEGRHSESETLNDVAVFANGSSVADVAEVLKSLKNGVGRNCVAEEARESISEAVNDRTVVANGNCVTEEARESTSEAVNDGAVNVNGSCVAKETRELISEAVNDGAVFSNGNGVNEEVGVLKSEAVNDGVVFSNGNGVTEDAGVLKSEGVSNGVASSGGFDSGDGGSGGVTCLRTYKRRKYDKSSSKGKAQEDCGKCAETASHIADQVVKEPLDATLGNTADDCAHRHWGNVVLKQLYQSLGNSNGGIKGCIGEALIRHQSCATTGTSKIGKDGQEFSSQFGRSSHRTRTEANGHANVMQNGSSSEPHGHGVTEMCQRVLCNLLTSEKFNSLCKTLFDKATKPESVFDFSVITLRMKQKVYEQSPALFLSDIQQVFGKLQDTFKEIVALSNSLSNISADSYSKLVGISAQRTSEDEKQVELDSHMKPEQTEECATYKVCCCSSCGERADGTDCLVCDSCEKVYHLSCIELAVNEIPHKSWYCANCTTIGFGSPHENCVVCARLNDTKTPKKIIGEESLPTNEETLDEFDDNSNDSYDGIQISTGGREKASCKVCGNEVEIKGEKIRICGHHFCPSKYYHARCLTSKQLNSYGYWWYCPSCLCQVCLTDQDDSQIVLCDGCDHAYHIYCMKPPLDSIPQGKWFCRKCDAGIKAISQAKKAYESNKLRTGECVSKPNANNNCNSKFVEELESCGGMDMLLTAANSLNFEENLAENQFE 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06432 750 FunFam PHD finger protein EHD3 isoform A 368 523 - -
Mepo3g06432 750 SUPERFAMILY FYVE/PHD zinc finger 635 685 IPR011011 -
Mepo3g06432 750 ProSitePatterns Zinc finger PHD-type signature. 631 680 IPR019786 -
Mepo3g06432 750 ProSiteProfiles Zinc finger PHD-type profile. 633 683 IPR019787 -
Mepo3g06432 750 Pfam PHD-finger 636 681 IPR019787 -
Mepo3g06432 750 PANTHER OS02G0192300 PROTEIN 454 555 - -
Mepo3g06432 750 Gene3D - 368 522 - -
Mepo3g06432 750 ProSiteProfiles Zinc finger PHD-type profile. 472 522 IPR019787 -
Mepo3g06432 750 SMART PHD_3 474 520 IPR001965 -
Mepo3g06432 750 SMART PHD_3 636 681 IPR001965 -
Mepo3g06432 750 SMART PHD_3 584 635 IPR001965 -
Mepo3g06432 750 SUPERFAMILY FYVE/PHD zinc finger 464 520 IPR011011 -
Mepo3g06432 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 576 688 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06432 635 702 C2H2 Transcription Factor Family AT3G01460 41.176 1.34e-13 73.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo3g06432 PHD 1.3e-13 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06432 - - psat:127082741 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06432 3 78337151 78343964 Mepo3g06432 3 78337151 78343964 ECH