LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g06426	ATGCAAAAAACGTGTGATGAGGGTGGCTCCGGTGGCCGGACGGTGGTGGTGGGAGTGAAAATGGATTCACCAAGCAAAGAGCTTCTTACGTGGGCTTTGGTTAAAGTTGCTCAACCTGGTGATCTTGTTCTTGCTCTGCATGTTCTTGGGACTAATGAAATTGTGAATGGAGATGGGAAATCATCGTTGCTTTCTCTTGTTAAGGCTTTTGACTCTGTTCTTAATGTTTATGAAGGATTCTGTAATTTGAAGCAGGTGGATCTTAAGCTAAAAATTTGCCGAGGATCATCGGTGAAGAAAATTTTGGTACGAGAAGCAAATGCTTATTCTGCAACTCATGTTATTGTTGGAAGTGTTCATGGGTTTCATAGAATTCGGTCATCTAGCTCTGTAGCTAAGTATTGTGCTAAAAAGTTATCCAAGGACTGTTGTGTTCTAGCTGTGAATAATGGAAAGGTTGTGTACAAGCGTGACAGCTTGGCAGCATCAACTGTTGCTGATGTACAAGGATTTGATCGTCATCGTGGAAATGGTTTGCTTGGTTCAATTCAATTGACACATGGTTTGCTTGGTTCGATTCAACTGACGCTCAGTAAGAATACAAAAGTACTTAATGCTGATACTGATGAGGGAACTCGACGGATTTCGGATCACAGTTTAGCTAAGGTTTTACTGGATTCAACAGAAAATGTTAGACATCAGAGTTGCTCAATTTGTGGCGCATTGCAGGACACTTCTTGCCATCAATCTGCAGAAGAGCCGTCAGAAGGATCTGAAGTCTCATCTGGTGATGGTGGCAATGAGAATTCTTTAGCAATAGTCCCTGTACAGACAACTGATGCGGGACAGCTTGAATTGAAACCCGGTTGGCCGCTACTACGTCAGAAGATTTTACCAGACCGGCAATTACCTGATAAACTGTTCACGCGCGACCAGATCTCTGTGGTCCAGTGGGCAATGAGGTTGCCGCGTAGAAATCTTTCATACCATGTTGATAATGATAAACAACTTAGTATTTGTGATAAAGCTCAGGGTCAATCTGTGGCTTTAGATAGTGAAAGTGGTGCCCTTATTCCAGTAGATTCAGAAATAGGGAAAACTTATTCGTCGCCTGAATGCAATTTAAAAAGTATTCCGAAAGAATTGGAGGGACTTCATGAGAAATACTCATCAACTTGCATATTGTTTGAGTACCAAGAACTTGTATCAGCAACATCAAATTTTTTGCCTGAAAACTTTATCGGGAAAGGAGGAAGCAGTAAGGTTTACCGGGGCTGCCTTCGTGATGGCAAAGAACTTGCAGTCAAGATCCTAAAGCCTTCATATGATGTTTTGAAAGAGTTTCTTTTGGAAATAGAAATCATCACTACATTGCATCACAAAAACATTATTTCCCTTATCGGGTTCTGCTTCGAGAATGGCAATCTACTCTTGGTCTATGATTTCTTATCAAGAGGAAGCCTTGAAGAGAACATTCACGGGACTAAGAAAAACCCTCGTGAGTTTGGTTGGACACAGAGATATAAGGTTGCAACAGGTGTTGCTGAAGCTTTAGAATATCTGCATTGTAAAGATGATCATCCCGTGATTCATCGGGATGTAAAATCATCCAATGTATTACTATCCGAAGATTTTGAACCTCAGCTCTCTGATTTTGGATTGGCTACGTGGGCATCAACGTCATCATCGCATATAACATGCACAGATGTTGCTGGAACCTTTGGTTATATGGCTCCTGAATACTTCATGTACGGCAAAGTAAATGATAAGATCGACGTCTATGCATTTGGTGTTGTGCTTCTTGAGCTTCTTTCAGGGAGAAAGCCCATAAGTGTTGATTATCCGAAAGGTCAACAGAATCTTGTTATGTGGGCAAGTCCACTTATAAATAGTGGAAAGGTGTCACAATTGTTAGATCCTAGTTTAGGTGATAACTATGATCATGATGAGATGGAAAGAATGGTATTAGCAGCCACTCTTTGTATCAAACGTGCTCCAAAAGCTAGGCCACCAATGAGCATTGTTTCAAAGCTACTTCAAGGCGATATTGATGCAATCAAGTGGGCAAGACTAGAAGTCAATGCTTTGGAAGCACACGAAATGCTCGATGATGAAGCATGTCCACCAAGTAATATACAGTCACATCTTAATCTTGCACTGCTTGATGTGGATGATGACTCACTCTCCATGTACAGTGTTGAGCAAAGTGTTTCATTGGAGGACTATTTGAGAGGCAGGTGGAGCCGAGCATCAAGTTTTGACTGA	2265	0.4141	MQKTCDEGGSGGRTVVVGVKMDSPSKELLTWALVKVAQPGDLVLALHVLGTNEIVNGDGKSSLLSLVKAFDSVLNVYEGFCNLKQVDLKLKICRGSSVKKILVREANAYSATHVIVGSVHGFHRIRSSSSVAKYCAKKLSKDCCVLAVNNGKVVYKRDSLAASTVADVQGFDRHRGNGLLGSIQLTHGLLGSIQLTLSKNTKVLNADTDEGTRRISDHSLAKVLLDSTENVRHQSCSICGALQDTSCHQSAEEPSEGSEVSSGDGGNENSLAIVPVQTTDAGQLELKPGWPLLRQKILPDRQLPDKLFTRDQISVVQWAMRLPRRNLSYHVDNDKQLSICDKAQGQSVALDSESGALIPVDSEIGKTYSSPECNLKSIPKELEGLHEKYSSTCILFEYQELVSATSNFLPENFIGKGGSSKVYRGCLRDGKELAVKILKPSYDVLKEFLLEIEIITTLHHKNIISLIGFCFENGNLLLVYDFLSRGSLEENIHGTKKNPREFGWTQRYKVATGVAEALEYLHCKDDHPVIHRDVKSSNVLLSEDFEPQLSDFGLATWASTSSSHITCTDVAGTFGYMAPEYFMYGKVNDKIDVYAFGVVLLELLSGRKPISVDYPKGQQNLVMWASPLINSGKVSQLLDPSLGDNYDHDEMERMVLAATLCIKRAPKARPPMSIVSKLLQGDIDAIKWARLEVNALEAHEMLDDEACPPSNIQSHLNLALLDVDDDSLSMYSVEQSVSLEDYLRGRWSRASSFD	754

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo3g06426	754	SUPERFAMILY	Protein kinase-like (PK-like)	389	678	IPR011009	-
	Mepo3g06426	754	ProSitePatterns	Protein kinases ATP-binding region signature.	414	436	IPR017441	GO:0005524
	Mepo3g06426	754	MobiDBLite	consensus disorder prediction	249	270	-	-
	Mepo3g06426	754	FunFam	probable receptor-like serine/threonine-protein kinase At5g57670	377	482	-	-
	Mepo3g06426	754	Pfam	Protein kinase domain	412	620	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g06426	754	Pfam	Universal stress protein family	13	145	IPR006016	-
	Mepo3g06426	754	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	13	151	-	-
	Mepo3g06426	754	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	529	541	IPR008271	GO:0004672\|GO:0006468
	Mepo3g06426	754	Gene3D	Transferase(Phosphotransferase) domain 1	483	692	-	-
	Mepo3g06426	754	PANTHER	OS08G0249100 PROTEIN	161	690	IPR046958	-
	Mepo3g06426	754	CDD	USP_Like	14	148	-	-
	Mepo3g06426	754	ProSiteProfiles	Protein kinase domain profile.	408	672	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g06426	754	FunFam	probable receptor-like serine/threonine-protein kinase At5g57670	12	149	-	-
	Mepo3g06426	754	Gene3D	Phosphorylase Kinase; domain 1	375	482	-	-
	Mepo3g06426	754	Gene3D	HUPs	12	150	IPR014729	-
	Mepo3g06426	754	CDD	STKc_IRAK	414	681	-	-
	Mepo3g06426	754	SMART	serkin_6	408	702	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo3g06426	754	FunFam	Putative receptor-like serine/threonine-protein kinase	483	695	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g06426	Mepo-Chr3	78303106	78307312	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g06426	395	675	Trihelix Transcription Factor Family	AT1G68690	46.341	9.35e-74	251

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-VI	Mepo3g06426		Pkinase	2.8e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g06426	-		-	pcin:129303222	991.875