Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06404 ATGTCGAGTCATAACAATCGTCGTTCATCGTTTTCTTCTTCAACAACGTCGTCAATGGCGAAACGACACCCACCTGTTACCGCTTTAACGTCAGAAAACAACGCCGGAAAAGTTTTAGCAGCCTCTGCCAAGAAACGTCCTCCTCTCACTAACCTCACCAATCAAAATTCTTCCCGCAACAACTCATCTACTTTGGTAACCAAAGTTGCAAAGACAAAGAAAGAACCTTCACCATGCAATTCTTCTTCAAGCTCTGTGATTTCTGTTACCAAAAAACCTACTTTGTCGAATGTTAAATCCTCTACTGTTGTTTTTCCTAAGGCCATTACTACTACTAGTACCACTTCTTCATTTTCTGGAAGGAATGAAGTTGTTCCTCCTCCTCCATTGGTTGCTCCTACTACCTTCAATGTTCCGGTTTCGAGTAGTATGGATTTATCGTCTCCTGGTAAATCCGATGGAATGTCGGTTTCTATGGACGAGACAATGTCGTCGTGTGATTCTTTCAAGAGTCCTGATATTGAATATGTGGATAACAGTGATGTTCCAGCTGTTGATTCTATTGAGAGGAAGACTTTTTGTAGTCTCAACATTTCTGATTCTAATTACCCATCAGGTAACATTTGTAGTAGAGACATTCTTGTTGAGTTGGAAAAGGGAGAGAAAATTGTTAATATTGATAATGATTACATGGATCCTCAGCTATGTGCTACCTTTGCCTGTGATATCTACAAGCATCTACGTGCATCTGAGACAAAGAAAAGGCCTTCAACAGACTTCATGGAGAAAATTCAGAAGGACATTAATCCCAGCATGCGTGCTATATTAATTGATTGGCTAGTGGAGGTGGCTGAAGAGTATAGACTTGTACCCGATACATTGTATTTGACAGTAAACTACATTGATCGATATCTTTCTGGGAATCCGATGAACAGGCAACAATTACAATTACTTGGAGTTGCTTCTATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCTCAGGTGGAGGAATTTTGTTATATAACTGATAACACATACTTCAAGGATGAGGTTTTGCAGATGGAATCTACTGTCTTGAATTTTCTAAAATTCGAAATGACTGCCCCAACAATTAAATGCTTCTTGAGAAGATTTGTACGTGCAGCTCAAGGAATTGATGAGGTCCCTTCACTACAACTAGAGTGCTTGACAAATTTTATCGCCGAATTATCTCTGTTGGAGTACAGTATGCTTTGTTATGCTCCTTCACTTATAGCAGCTTCTTCAATTTTCCTGGCCAAATATATGCTTTTCCCTGCCATGAAACCATGGAATCCGACATTGCAGCATTACACTCAATACCAGCCTTCAGATTTGTGTGTTTGTGTAAAGGATCTCCACCGTCTTTGTTGCAACAGCCCTAATTCTACTTTACCTGCAATTAAGGAGAAATACAATCAGCACAAGTATAAATATGTTGCCAAGAAGTACTGCCCTCCTTCAATACCTCAAGAATTTTTCCAGAACTGA 1515 0.396 MSSHNNRRSSFSSSTTSSMAKRHPPVTALTSENNAGKVLAASAKKRPPLTNLTNQNSSRNNSSTLVTKVAKTKKEPSPCNSSSSSVISVTKKPTLSNVKSSTVVFPKAITTTSTTSSFSGRNEVVPPPPLVAPTTFNVPVSSSMDLSSPGKSDGMSVSMDETMSSCDSFKSPDIEYVDNSDVPAVDSIERKTFCSLNISDSNYPSGNICSRDILVELEKGEKIVNIDNDYMDPQLCATFACDIYKHLRASETKKRPSTDFMEKIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNPMNRQQLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESTVLNFLKFEMTAPTIKCFLRRFVRAAQGIDEVPSLQLECLTNFIAELSLLEYSMLCYAPSLIAASSIFLAKYMLFPAMKPWNPTLQHYTQYQPSDLCVCVKDLHRLCCNSPNSTLPAIKEKYNQHKYKYVAKKYCPPSIPQEFFQN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06404 504 MobiDBLite consensus disorder prediction 1 37 - -
Mepo3g06404 504 Pfam Cyclin, N-terminal domain 242 368 IPR006671 -
Mepo3g06404 504 Gene3D - 256 369 - -
Mepo3g06404 504 ProSitePatterns Cyclins signature. 273 304 IPR006671 -
Mepo3g06404 504 MobiDBLite consensus disorder prediction 1 86 - -
Mepo3g06404 504 CDD CYCLIN_AtCycA_like_rpt1 232 367 - -
Mepo3g06404 504 SMART cyclin_7 375 463 IPR013763 -
Mepo3g06404 504 SMART cyclin_7 278 362 IPR013763 -
Mepo3g06404 504 MobiDBLite consensus disorder prediction 47 86 - -
Mepo3g06404 504 SUPERFAMILY Cyclin-like 371 496 IPR036915 -
Mepo3g06404 504 SUPERFAMILY Cyclin-like 232 368 IPR036915 -
Mepo3g06404 504 FunFam Cyclin A1 358 490 - -
Mepo3g06404 504 MobiDBLite consensus disorder prediction 142 162 - -
Mepo3g06404 504 PIRSF Cyclin_A_B_D_E 2 501 IPR046965 GO:0016538|GO:0044772
Mepo3g06404 504 Gene3D - 242 490 - -
Mepo3g06404 504 PANTHER CYCLINS 170 482 IPR039361 -
Mepo3g06404 504 Pfam Cyclin, C-terminal domain 371 490 IPR004367 -
Mepo3g06404 504 CDD CYCLIN_AtCycA-like_rpt2 371 485 - -
Mepo3g06404 504 FunFam Mitotic cyclin 6 256 356 - -
Mepo3g06404 504 SMART Cyclin_C_2 371 494 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06404 Mepo-Chr3 78085893 78091839 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06404 6 504 Core Cell Cycle Gene Families AT1G44110 60.198 0.0 567
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06404 K06627 - gmx:547781 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06404 3 78085893 78091839 Mepo3g06404 3 78085893 78091839 ECH