Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06403 ATGTTTACCCGAAGCCGACGCTTTGCTTCTTCTTCATCATCGGAGAAGAAGCCTTCCGTTTCAGAGAATTCAACTTCAAACAAGAATGTTGCCGCCGTTAAGACTCGCTTGACGAAGAAACGTCCCGCTCTCGCCGACGTTACCAATAACAGAAATGCCTCTCTCGTCAAATCCTCCCTTGCTGCTCCATCTAAGCCCATGGTTCCATGTGTGTCCAAAACTGCAAAGACAAAGAAGGATTCTATTGCGAGTTCGCAGAAAAATGTTATGTCCAAGAACATTTTGCAACCCTCATCGAGAGTAAAATCGAGTGGATTTCTGCTCTCCAAAGAGGCATGTTCAACCAAAGCTAGTCAAACGAAGACTGGAGTTAAAGCATTCATTGCTCCAAGCAATGACGGTGCTGTTTGTCCAGATTTTAAGAGTGTGGTCTGTAGTCCGAGATGGATGGACATTTACCCAAGTAATTCCTTCAGTGGTTCTGCTTCACTGGATGAGAGCATGTCAACCAGCGATTCTCTGATGACTCCGGAATTTGAATATATTCGCAATGATGATGTTGTATCGATCAAATCAATTGAGAATAAAACATGCAACATTCTCAATATTTCAGACTCTTCCAGAATGGCAGGTTCAATACATGATATTGACACCATACTGAAGTCAAGAGCAAATGAATTTGTAGACATTGACTGCAATACCAAAGACTCACAGTTTTGTGCATCCTTTGCCCATGAAATCTATGAAAATTTGCGTGTATCAGAGAAATTTAAAAGGCCATCTATGGACTACATGGAGAAGATACAGAAAAACATCAATGCTAGCATGCGGGCAATGCTTATTGATTGGCTTGTGGAGGTTGCTGACGAGTACAGACTTCTACCTGATACACTATTTTTGGCAGTTAACTACCTTGATCGCTATCTTTCAGGCAAAGCAATGAACACACAGCAGTTACAACTACTTGGTGTTACCTGCATGATGATTGCTGCTAAATATGAGGAGATCTGTGCACCTAAGGTGGAAGAGTTCTGTTATGTAACTGATAATACATATTCTAAGGAGCAGGTGTTGGAGATGGAGTCCTCTGTTCTGAATTTCTTGAAGTTTGAAATGACAGCTCCTACAATTAGATGTTTTTTGAGACGCTTCATTACTGTTGCCCAACAAACATGTGAGATTCCATTGATGCAGTTGGAGTATTTGGCCGACTATGTAGCGGATTTATCGCTTCTCGAGTATGATATGCTTAAGTACACCCCATCATTAATAGCTGCATCAGCCACTTTCTTGGCTAAATATATACTACTTTCGACAAAGAATCCCTGGAACTCTATGCTAAGGCATTACACAGGTTACCAAGCATCAGAATTGCGGGAATGTGTTGAGGGATTGCATTTGTTGTACCGCAATGGCTATCATAGTTCACCTTCCATTACTGCTATCAGAGAGAAATACAGTCAGCATAAGTTCAAGTTTGCTGCAAAGAAATGTTGTCCTCCATCAATACCAGTAGAAGTATTTCACAACTGA 1533 0.4123 MFTRSRRFASSSSSEKKPSVSENSTSNKNVAAVKTRLTKKRPALADVTNNRNASLVKSSLAAPSKPMVPCVSKTAKTKKDSIASSQKNVMSKNILQPSSRVKSSGFLLSKEACSTKASQTKTGVKAFIAPSNDGAVCPDFKSVVCSPRWMDIYPSNSFSGSASLDESMSTSDSLMTPEFEYIRNDDVVSIKSIENKTCNILNISDSSRMAGSIHDIDTILKSRANEFVDIDCNTKDSQFCASFAHEIYENLRVSEKFKRPSMDYMEKIQKNINASMRAMLIDWLVEVADEYRLLPDTLFLAVNYLDRYLSGKAMNTQQLQLLGVTCMMIAAKYEEICAPKVEEFCYVTDNTYSKEQVLEMESSVLNFLKFEMTAPTIRCFLRRFITVAQQTCEIPLMQLEYLADYVADLSLLEYDMLKYTPSLIAASATFLAKYILLSTKNPWNSMLRHYTGYQASELRECVEGLHLLYRNGYHSSPSITAIREKYSQHKFKFAAKKCCPPSIPVEVFHN 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06403 510 CDD CYCLIN_AtCycA-like_rpt2 375 491 - -
Mepo3g06403 510 Pfam Cyclin, C-terminal domain 375 498 IPR004367 -
Mepo3g06403 510 FunFam Mitotic cyclin 6 260 360 - -
Mepo3g06403 510 SMART Cyclin_C_2 375 500 IPR004367 -
Mepo3g06403 510 SUPERFAMILY Cyclin-like 375 502 IPR036915 -
Mepo3g06403 510 SUPERFAMILY Cyclin-like 236 372 IPR036915 -
Mepo3g06403 510 FunFam Cyclin A1 362 496 - -
Mepo3g06403 510 PANTHER CYCLINS 195 492 IPR039361 -
Mepo3g06403 510 MobiDBLite consensus disorder prediction 1 33 - -
Mepo3g06403 510 PIRSF Cyclin_A_B_D_E 1 507 IPR046965 GO:0016538|GO:0044772
Mepo3g06403 510 ProSitePatterns Cyclins signature. 277 308 IPR006671 -
Mepo3g06403 510 Gene3D - 246 495 - -
Mepo3g06403 510 Gene3D - 260 373 - -
Mepo3g06403 510 SMART cyclin_7 379 467 IPR013763 -
Mepo3g06403 510 SMART cyclin_7 282 366 IPR013763 -
Mepo3g06403 510 MobiDBLite consensus disorder prediction 1 50 - -
Mepo3g06403 510 Pfam Cyclin, N-terminal domain 246 372 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06403 Mepo-Chr3 78073409 78078439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06403 113 510 Core Cell Cycle Gene Families AT1G44110 54.902 2.33e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06403 K06627 - cave:132184255 546.969