Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06399 ATGGCAAACTTGATACAGCAGCAGCAGCAGCAGCAGCAACATCAACATCAAGTTATGGAAACATCCTCAAATCATGATGAGACACAAAAATCTGGATGGAGAAAGTTCTTGCCATATATAGGCCCTGGTTTTCTTGTTTCTTTGGCTTACCTTGATCCTGGAAACATGGAAACTGATTTGCAAGCTGGAGCTAACCACGGATACGAGTTGCTGTGGTTGGTACTTATTGGACTCATATTCGCGCTTATAATTCAGTCACTGGCTGCAAATCTTGGTGTAACCACCGGCAAACACCTTTCAGAAGTATGTAAAGTTGAATATCCATTATTTGTGAAGTATTGCTTATGGTTATTAGCAGAGGTTGCTGTCATAGCTGCTGACATACCTGAAGTGATTGGGACAGCCTTTGCTCTCAACATACTATTCAACATCCCATTATGGGCAGGAGTTCTGTTGACTGGCTTCAGCACTCTCTTGCTTTTGAGTCTGCAGAGGTTTGGGGTGAGGAAGTTGGAACTACTGATAACAATCCTAGTATTTGTAATGGCTGCATGTTTCTTTGCTGAAATGAGCTATGTAAATCCCCCAGCTTCTGGTGTACTTAAGGGAATGTTTGTACCCAAACTGGCTGGTGAAGGAGCCGTAGCCGATGCTATTGCCCTTTTGGGGGCCCTTATCATGCCGCACAATCTTTTCCTCCACTCTGCTCTTGTGCTATCTAGAAAAGTACCTAATTCTGTGAGAGGCATCAATGAAGCATGTAGATATTTCCTCTATGAGAGTGGATTCGCTTTGTTTGTGGCGTTTTTAATCAATGTTGCAATGATTTCTGTATCGGGCACTGTCTGCTCTGCCAATGACCTATCTGGAGACAATGTTGAACGCTGCAATGATCTCACCCTTAACTCCGCTTCTTTCCTTCTCAAGAATGTCTTGGGACGATCAAGCTCAACCATTTATGCCATAGCACTGCTTGCCTCAGGACAAAGTTCTACCATTACAGGAACTTATGCTGGACAGTACATCATGCAGGGTTTCTTAGACATAAGGATGAAAAGATGGAAAAGGAACTTGATGACTAGATGCATTGCCATAGCACCTAGTCTTGCTGTTGCCATCGTTGGTGGTTCTTCTGGCTCTAGTCGCCTTATCATCATTGCATCGATGATACTTTCTTTTGAGCTTCCATTTGCTTTAATTCCACTCCTTAAGTTTAGCAGCAGCAGTACCAAAATGGGACCTCACAAGAATTCTATGATTATCATTACAATCTCATGGATACTAGGTTTTGGAATCATTAGTATCAATGTGTACTACCTCAGTACTGCCTTTGTGAAGTGGATAATACATAGTAGTCTACCAAAGGTGGCAAATGTGTTCATTGGGGTTATAGTATTTCCTCTAATGGGAATTTATATTGCCTCAGTTATCTACCTTACCTTCAGAAAAGACACTGTTGAGACGTTCATCGAGACGAAAAATGATACAGTAATGCAAAACCAAGTGGAAAAAGGAACTGTGGATAATGGTCAATTAGAGTTGAGCCATGTTCCTTATAGAGAAGATTTAGCTGATATACCACTACCAGAATAA 1593 0.4168 MANLIQQQQQQQQHQHQVMETSSNHDETQKSGWRKFLPYIGPGFLVSLAYLDPGNMETDLQAGANHGYELLWLVLIGLIFALIIQSLAANLGVTTGKHLSEVCKVEYPLFVKYCLWLLAEVAVIAADIPEVIGTAFALNILFNIPLWAGVLLTGFSTLLLLSLQRFGVRKLELLITILVFVMAACFFAEMSYVNPPASGVLKGMFVPKLAGEGAVADAIALLGALIMPHNLFLHSALVLSRKVPNSVRGINEACRYFLYESGFALFVAFLINVAMISVSGTVCSANDLSGDNVERCNDLTLNSASFLLKNVLGRSSSTIYAIALLASGQSSTITGTYAGQYIMQGFLDIRMKRWKRNLMTRCIAIAPSLAVAIVGGSSGSSRLIIIASMILSFELPFALIPLLKFSSSSTKMGPHKNSMIIITISWILGFGIISINVYYLSTAFVKWIIHSSLPKVANVFIGVIVFPLMGIYIASVIYLTFRKDTVETFIETKNDTVMQNQVEKGTVDNGQLELSHVPYREDLADIPLPE 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06399 530 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 11 490 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 Pfam Natural resistance-associated macrophage protein 57 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 34 410 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 115 141 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 388 407 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 143 162 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 218 241 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 168 189 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 356 373 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 PRINTS Natural resistance-associated macrophage protein signature 328 347 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 Hamap Divalent metal cation transporter MntH [mntH]. 23 444 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06399 530 NCBIfam Nramp family divalent metal transporter 41 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06399 Mepo-Chr3 78041016 78045573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06399 24 530 Inorganic Solute Cotransporters AT1G15960 59.570 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06399 K21398 - gmx:100787785 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06399 3 78041016 78045573 Mepo3g06399 3 78041016 78045573 ECH