Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06398 ATGGCAAGCTCAATGCAACATCAAGAAGTGAATCATGGTAGCAACAACCGTATAGTAGCCGTCAATGTGACTCCTTCTAGCACACCATCTTATAACCATGATGATTCCTCAAAGCAAGATCAGAAACCAGGATGGAAGAAGTTCTTGGCATATGTAGGTCCTGGTTTTCTTGTCTCCTTGGCCTACCTTGATCCCGGAAATATGGAAACTGATTTGCAAGCCGGAGCTAACCATGGATATGAGCTGCTGTGGATCATTCTTATTGGACTCATATTTGCCTGCATAATTCAATCATTGGCTGCAAATCTTGGAGTATGCACCGGAAAACACCTTTCAGAAATTTGTAAAGCTGAGTACCCATGGTTTGTGAAATACTGTTTATGGATATTAGCAGAACTTGCTGTCATAGCTGCAGACATACCTGAAGTGATTGGGACGGCCTTTGCACTAAACATACTATTCCACGTCCCTGTATGGGGAGGGGTTCTGTTGACCGGGTGCAGCACTCTCTTGTTTTTGGGTCTACAAAGATTTGGGGTGAGGAAGTTGGAACTGCTGATTTCAATTCTAGTATTTGTAATGGCTGCATGTTTCTTTGGTGAATTGAGCTATGTAAAACCCCCTGCTAAAGGAGTAATTGAGGGAATGTTTGTTCCCAAACTCAGCGGAAATGGTGCTGTAGGCGATGCTATTGCCCTTTTGGGTGCCCTTATCATGCCGCACAATCTTTTCCTCCACTCTGCTCTAGTGCTATCTCGAAAAATACCTGGTACTAAGCGCGGCATCAATGATGCATGCAGATACTTTCTCATTGAGAGTGGTTTCGCTCTGTTCGTTGCATTTCTAATCAATGTTGCAATGATTTCTGTGACTGGCACTGTTTGCAAAGCTGATGATATTTCTGGAGAGAATGCTGATCGTTGCAGTGATATTACCCTTAACTCTGCTTCTTTCCTTCTCCAGAATGTGTTAGGACGTTCAAGCTCGACTATTTATGCCATAGCATTGCTAGCCTCAGGACAAAGTTCTGCCATCACTGGAACCTATGCAGGCCAGTTTATCATGCAGGGTTTCTTGGACTTGAAGATGAAAAAATGGATAAGGAACTTGGTGACTAGGATTGTTGCCATAGCACCAAGTCTTGTTGTCTCTATCATTGGTGGTTCTTCTGGAGCTGGAAGACTCATTATCATTGCATCGATGATACTTTCTTTTGAGCTTCCATTCGCTTTAATTCCACTCCTTAAGTTTAGCAGCAGCAGGACCAAGATGGGACCTCACAAGAATTCTATCATTATCATTATCATCTCATGGATACTGGGTTTGGGAATCATTGGAATCAATGTGTACTACCTCATTACTGCTTTTGTGGGTTGGATAATTCATAACAGTCTACCAAAGGTGGCAAACGTGTTCATTGGGCTCATAGTGTTTCCTCTAATGACACTGTATATCGTCTCAGTTATCTATCTAACATTCAGAAAAGACACTGTTGTAACGTTTGTGGAGGTTAAGGATGACCCGTCAATGCAAACCCACGTGGAAAAGGGGTTTGTAAACGATGGTCAGTTAGAGTTGAGTTATACCCCTTATAGAGAAGATTTAGCTGATATCACCCGACCAGAGGGACCTAGGTTGTGA 1641 0.4278 MASSMQHQEVNHGSNNRIVAVNVTPSSTPSYNHDDSSKQDQKPGWKKFLAYVGPGFLVSLAYLDPGNMETDLQAGANHGYELLWIILIGLIFACIIQSLAANLGVCTGKHLSEICKAEYPWFVKYCLWILAELAVIAADIPEVIGTAFALNILFHVPVWGGVLLTGCSTLLFLGLQRFGVRKLELLISILVFVMAACFFGELSYVKPPAKGVIEGMFVPKLSGNGAVGDAIALLGALIMPHNLFLHSALVLSRKIPGTKRGINDACRYFLIESGFALFVAFLINVAMISVTGTVCKADDISGENADRCSDITLNSASFLLQNVLGRSSSTIYAIALLASGQSSAITGTYAGQFIMQGFLDLKMKKWIRNLVTRIVAIAPSLVVSIIGGSSGAGRLIIIASMILSFELPFALIPLLKFSSSRTKMGPHKNSIIIIIISWILGLGIIGINVYYLITAFVGWIIHNSLPKVANVFIGLIVFPLMTLYIVSVIYLTFRKDTVVTFVEVKDDPSMQTHVEKGFVNDGQLELSYTPYREDLADITRPEGPRL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06398 546 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 33 500 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 NCBIfam Nramp family divalent metal transporter 53 421 - -
Mepo3g06398 546 Hamap Divalent metal cation transporter MntH [mntH]. 32 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 230 253 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 340 359 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 368 385 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 Pfam Natural resistance-associated macrophage protein 69 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo3g06398 546 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06398 Mepo-Chr3 78029622 78035803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06398 9 542 Inorganic Solute Cotransporters AT1G15960 57.463 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06398 K21398 - gmx:100787785 866.685