Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06381 ATGTCGGGTGAAGAGTCACAGAAGAAGGTGGTGTTTGACGGCGAAGCGGCGTCATCGTTGGTGAAGGAGCTGAGGGTGAGCTTTGGTTCTGGAAAGACACGAAGTTATGAATGGAGAATATCACAAGTGAAGGCTCTTTTGAAGATGGTTGATGAACAACAGGATCAAATCATTGATGCTCTTCGTTCTGACCTTGCTAAACCACCGCTAGAAACCGTTGTTTACGAGATTGGTATGTTTAAAAACTCATGTGAAGTCACGCTGAAGGAATTGAAACAATGGATGACGCCAGAGAAGGCTAAAACTTCAGTCACAACTTTTCCTTCTTCAGCTGAAATAGTACCTGAACCACTTGGTGTTGTGTTAGTCATCTCTGCATGGAACTATCCATTTTTGCTGTCGCTTGATCCAGTCGTTGGAGCTATAGCAGCCGGAAACGCCGTGGTTCTAAAACCATCAGAAATTGCTCCAGCCTCGTCTTCACTGCTGGCAAACTTATTAGGGAGGTACATGGATAACTCATCTGTAAGAGTTGTGGAGGGCGCAGTTGATGAAACTACTGCATTGTTGCAGCAAAAGTGGGACAAAATTTTCTATACAGGTAATGGAAAAGTGGGACGGATAGTGATGGCTGCTGCTGCAAAACACCTTACACCAGTCGTTCTGGAGCTTGGAGGAAAATCTCCAACTGTTGTGGATTCAAATGTCAATTTAGAGGTTACAGCTAGACGGATAATTTCAGGAAAGTGGTGCTGTAACAATGGACAAGCCTGCATTTCTCCTGATTACATTATAACAACAAAAGACTTTGCCCCCAAATTGGTTGATGCCTTAAAGAAAGAATTGGAAAGCTTCTTTGGAAAGAATCCAATAGAATCCAATGATTTGTCGCGCATTGTGAGTTCTAACCACTTTGCTCGCTTGATAAAGATGTTGGACGACGATAAGGTTTCTGGCAAGATTGTTTATGGAGGTGAAAAGGATGAAAGCAAATTGAGGATTGCTCCCGCTATTGTATTAGACGCTCCACAAGATTCTCTGATAATGAGCGAGGAGATCTTTGGTCCATTGCTTCCCATCATCACGGTGAACAAGCTGGAAGAAAGCTTCGATTTAATCAACGCAGGAACAAAGCCGCTTGCTGCATATTTATTTACAAATGACAACAAGTTCAAGGAGCAATTTGTGAAGAATGTTTCTGCTGGGGGTTTGCTTATCAATGACACTGTCTTACATCTCGTGGTTCATACTTTGCCATTTGGGGGAGTTGGTGACAGTGGAATGGGTGCATACCATGGCAAATTCTCCTTTGATGCTTTTACTCACAGAAAGGCAGTTCTTTATCGCGGTTTTACGGGTGATGCATCGATAAGGTACCCACCTTACACTGATACAAAGCAGAAATTGATGAAGGCTCTAGTCGCCGGCGATGTTACTGGTGTTGTTCGTGCTCTTTTTGGATGGTCCTAG 1470 0.434 MSGEESQKKVVFDGEAASSLVKELRVSFGSGKTRSYEWRISQVKALLKMVDEQQDQIIDALRSDLAKPPLETVVYEIGMFKNSCEVTLKELKQWMTPEKAKTSVTTFPSSAEIVPEPLGVVLVISAWNYPFLLSLDPVVGAIAAGNAVVLKPSEIAPASSSLLANLLGRYMDNSSVRVVEGAVDETTALLQQKWDKIFYTGNGKVGRIVMAAAAKHLTPVVLELGGKSPTVVDSNVNLEVTARRIISGKWCCNNGQACISPDYIITTKDFAPKLVDALKKELESFFGKNPIESNDLSRIVSSNHFARLIKMLDDDKVSGKIVYGGEKDESKLRIAPAIVLDAPQDSLIMSEEIFGPLLPIITVNKLEESFDLINAGTKPLAAYLFTNDNKFKEQFVKNVSAGGLLINDTVLHLVVHTLPFGGVGDSGMGAYHGKFSFDAFTHRKAVLYRGFTGDASIRYPPYTDTKQKLMKALVAGDVTGVVRALFGWS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06381 489 PANTHER ALDEHYDE DEHYDROGENASE 16 481 IPR012394 GO:0006081
Mepo3g06381 489 FunFam Aldehyde dehydrogenase 25 229 - -
Mepo3g06381 489 PIRSF ALDH 3 484 IPR012394 GO:0006081
Mepo3g06381 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 226 426 IPR016163 GO:0016620
Mepo3g06381 489 SUPERFAMILY ALDH-like 20 454 IPR016161 GO:0016491
Mepo3g06381 489 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 444 IPR016162 GO:0016491
Mepo3g06381 489 Pfam Aldehyde dehydrogenase family 31 446 IPR015590 GO:0016491
Mepo3g06381 489 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 222 229 IPR029510 GO:0016491
Mepo3g06381 489 FunFam Aldehyde dehydrogenase 226 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06381 Mepo-Chr3 77863594 77868013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06381 12 489 Aldehyde Dehydrogenase Gene Family AT4G34240 64.226 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06381 K00128 - gmx:100803104 799.66