Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06378 ATGGCATCCGAGCTTCAATTGCCACCGGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCACCTCGCAGCCTATCGCCGTTCCGATCATCGCCGAAATTGATCTATATAAATATGATCCTTGGGACCTCCCAGGTATGGCTTCTTATGGAGAAAAGGAGTGGTACTTTTTCTCGCCACGAGACAGAAAGTACCCAAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACCGGGGCGGATAAACCAATAGGTCACCCTAAACCGGTTGGGATCAAGAAGGCGTTGGTGTTTTACGCGGGTAAAGCACCTAAAGGTGATAAAACCAATTGGATCATGCACGAGTATCGTTTGGCTGATGTAGATCGCACCATTCGCAAAAAGAACAGCTTAAGGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGTACAATTGAGAAACAACCAAGCAACGGTGTTGTCAACCGAAAAACTGAACATTCTGAAATCGAAGACAGGAAGCCGGATATTGTGACACGTGGAGGTGGTCTTCCACCACATCCTCCACCGCAAACCACGGCTGGAATTAGGGATTACATGTACTTTGACACATCAGATTCGATTCCTAAGCTGCACACAGATTCGAGTTGTTCGGAACACGTGGTGTCACCGGAGTTTGCAAGTGAGGTGCAGAGCGAGCCTAAGTGGAACGAGTGGGAAAAGAATCTTGAGTTTCCTTATAATTATGTTGATGCCACTATGAACACTGGTTTTGGGTCCCAATTCCAAAATACTAATCCATTGCAAGATATGTTCATGTACTTGCCCAAAACCTTTTGA 867 0.4717 MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRTIRKKNSLRLDDWVLCRIYNKKGTIEKQPSNGVVNRKTEHSEIEDRKPDIVTRGGGLPPHPPPQTTAGIRDYMYFDTSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDATMNTGFGSQFQNTNPLQDMFMYLPKTF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06378 288 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Mepo3g06378 288 Gene3D NAC domain 16 161 IPR036093 GO:0003677|GO:0006355
Mepo3g06378 288 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Mepo3g06378 288 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Mepo3g06378 288 PANTHER NAC TRANSCRIPTION FACTOR 56 7 213 - -
Mepo3g06378 288 FunFam NAC transcription factor 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06378 Mepo-Chr3 77849196 77851543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06378 1 288 NAC Transcription Factor Family AT1G01720 70.333 7.50e-146 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g06378 NAM 1.2e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06378 - - gmx:100805768 516.153