Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06377 ATGCTACTATATGTTCATCTCCTCAAATACCTCAAGGGTCGTGTTCTATTCTCATTCCCTCAATCGTACCGTAATACCTTTTTTTCTTCAATGGAACCCGAAGAGGGAAAACAATCTTCACAAAAAAATCCATACACTGAACTTGAGGAAGTTAGCTCTGATTTTGTTCAAGCAATTGGCTTACAAGAACAAGAGTTAGAGAGAACAACATTCACAAATCTAGCAACCATTGAAAGTGAAAGTGATGAAGATGTAAGTGACTCCTCTTTTAGTAATGATGATATTGGTGATGCTGATTTTTCATTTAGTCAGGAGTTTGAAACCGATCTTCAGTTTCTTGAAGATGAAGGAAGCAATATCGATGATGATGATTATGACGACGATGAAATGGAGTTGGAAGAAGATGAGGTTGATCCAGATGAATTATCTTATGAAGAGTTGATTGAATTAGGAGACTTCATAGGAGAAGAGAAGAGGGGATTACCAGCTAATGAAATCTCTTCTTGCTTACACCCTTATACTTGCAAAATTGCTGAAAGCACAAGTGGAATAGATCGTTGTGTGATTTGCCAGATTGAATATGAAGAAGGTGAAGCCTTGGTTGCACTTCATTGTGACCATCCTTATCATACAGATTGTATAAGCAAGTGGCTTCAAATTAAGAAGGTTTGTCCAATCTGTAGCAATGAAGTATCAAAAACCAACAAAGCTAAGAACACTTGA 723 0.3693 MLLYVHLLKYLKGRVLFSFPQSYRNTFFSSMEPEEGKQSSQKNPYTELEEVSSDFVQAIGLQEQELERTTFTNLATIESESDEDVSDSSFSNDDIGDADFSFSQEFETDLQFLEDEGSNIDDDDYDDDEMELEEDEVDPDELSYEELIELGDFIGEEKRGLPANEISSCLHPYTCKIAESTSGIDRCVICQIEYEEGEALVALHCDHPYHTDCISKWLQIKKVCPICSNEVSKTNKAKNT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06377 240 MobiDBLite consensus disorder prediction 113 140 - -
Mepo3g06377 240 SMART ring_2 187 227 IPR001841 -
Mepo3g06377 240 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 172 240 IPR013083 -
Mepo3g06377 240 FunFam E3 ubiquitin ligase BIG BROTHER-related 153 234 - -
Mepo3g06377 240 Pfam Ring finger domain 186 227 IPR001841 -
Mepo3g06377 240 ProSiteProfiles Zinc finger RING-type profile. 187 228 IPR001841 -
Mepo3g06377 240 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 41 232 IPR033276 GO:0004842|GO:0016567|GO:0046621
Mepo3g06377 240 SUPERFAMILY RING/U-box 186 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06377 Mepo-Chr3 77836525 77837557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06377 123 231 C3H Transcription Factor Family AT3G63530 42.478 4.54e-26 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06377 3 77836525 77837557 Mepo7g02287 7 33749172 33762484 ECH
Mepo3g06377 3 77836525 77837557 Mepo3g06377 3 77836525 77837557 ECH
Mepo3g06377 3 77836525 77837557 Mepo7g02287 7 33749172 33762484 PCT