Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06365 ATGACAGTTGATATCTCCAAGGTCTTCCAAAAACTTTGCAACAAAATTGCAATCTTACTAATATTCGTGTTAGTAGAATTTATCATCTTCATTTGGAAACTAACATCAGATACACAACCAATCACAACTCGCCAATACATCAAATTCATCGAAGAAAAGAACCCTACGATTCGTTACAACAAAAAGTTGAATTCGCACGGGGATTGTAGTGTTTGCTTATGCGAATTCGAAGAAGGAGAGAAGGTTCGGAGGTTGAAGTGCAAACACACATTTCATAAGGATTGTTTGGATAAATGGTTGCAAGATTATTTTGCTACATGTCCACTTTGTAGGGAACAAGTTTTACCAGATAATGTTGTGTTAAAACATCGTGAGCAACGAAATCAACAGAGTAATATTGAAGGGAATGATGAAAATCTTCCCTATGTGTTGTTCTTGTTACGTGGTGGTAATAACAGTCACTTGCGTAGATATGTCTGA 480 0.3625 MTVDISKVFQKLCNKIAILLIFVLVEFIIFIWKLTSDTQPITTRQYIKFIEEKNPTIRYNKKLNSHGDCSVCLCEFEEGEKVRRLKCKHTFHKDCLDKWLQDYFATCPLCREQVLPDNVVLKHREQRNQQSNIEGNDENLPYVLFLLRGGNNSHLRRYV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06365 159 PANTHER - 5 153 - -
Mepo3g06365 159 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 116 IPR013083 -
Mepo3g06365 159 ProSiteProfiles Zinc finger RING-type profile. 69 111 IPR001841 -
Mepo3g06365 159 SMART ring_2 69 110 IPR001841 -
Mepo3g06365 159 Pfam Ring finger domain 68 111 IPR001841 -
Mepo3g06365 159 SUPERFAMILY RING/U-box 49 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06365 Mepo-Chr3 77717743 77718453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06365 14 122 C3H Transcription Factor Family AT1G15100 32.283 2.45e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06365 K16282 - gmx:102661897 178.333