Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06357 ATGGGATTGAGAGAACGTAGCAGCAGCGGCATGGAGGATACAGATGGGACATTAGCAAGTATTGCTCAATGCATTGAGCAGCTGCGTCACAGCTCATCTTCTATGCAAGAGAAAGCGTATTCCTTGAAGCAATTATTGGAGCTTATTGATACGCGTGAAAATGCTTTTAGTGCAGTTGGATCTCATTCTCAGGCAGTTCCGGTGCTTGTTTCCCTTCTCCGGTCAGGGTCTTTAAGTGTGAAGATACAGGCAGCAACTGTCTTGGGCTCACTTTGTAAAGAAAACGAGTTAAGGGTGAAAGTCTTGCTTGGAGGATGCATTCCTCCTTTGCTCGGTCTACTGAAGTCCAGTTCTGAAGAAGGTCAAGTAGCTGCTGCAAAGACCATTTTTGCTGTTTCTCAAGGTGATGCCAAAGATCACGTTGGATCAAAAATCTTTTCAACTGAAGGAGTTGTTCCAGTGCTCTGGGAACAGCTGCAAAAGGGCCTAAAAAGTGGAAGTGTAGTAGATAGTTTATTGACTGGAGCATTGAAAAATCTTTACAGTAGTACTGAGAGATTCTGGAATTCGACAATACAGGCTGGAGGAGTGGACATATTACTGAAGTTACTGACAACAGGCCAGTCTAGCACATTAGCAAATGTGTGCTTTTTACTTGGCTGTATGATGATGGAAGATGCATCTTTTTGTTCAAAGGTATTGACAGCAGATGTAACAAAACAACTCCTCAAACTTTTAGGCCCTGATAATGATGCCCCAGTTAGAGCTGAAGCAGCTGGTGCTATTAAATCTCTATCTGCCCAGTGCCAAGATGCAAGGAAAGAGATAGCCAATTACAATGGCATTCCTGCTTTGATTAATGCTACCATAGCTCCTTCCAAAGAGTTCATGCAAGGTGAGTATGCTCAAGCAATACAGGAGAATGCCATGTGTGCTCTTGCAAACATCTCTGGTGGTTTGTCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCTCCTCACCGACCCAAACTTCCGACACATTGGGAGCTTTAGCTTCAGCTCTTATGATATATGACGACAAGGCAGAATCTACTAGAGCATCAGATCCTTTGGCCGTTGAGCAGACATTACTCGAGCAATTTAAACCTCACTCGCCCTTCCTTGTGCAGGAAAGGACCATCGAAGCTCTTGCCAGTTTGTATGGAAATCCTATACTCTCACTTAAACTTGCAAATTCTGATGCAAAGCGTTTGCTTGTTGGTTTAATAACAATGGCTGCTAATGAAGTGCAAGATGAGCTCTTAAAAGCTCTCTTGACACTATGCAATAGTGAATGCAGTCTATGGCGTGCACTTCAAGGCCGCGAAGGAGTTCAGCTATTGATATCTCTTTTGGGGCTTTCATCAGAACAGCAACAAGAATGCGCTGTTGCCCTGCTCTGTCTTTTGTCTAATGAAAATGATGAAAGTAAATGGTCCATTACTGCTGCTGGTGGTATACCTCCACTTGTACAAATTTTGGAGTCAGGATCTGCAAAAGCAAAGGAAGACTCGGCAACAATCCTCAGGAACCTATGTGATCACAGTGAGGATATACGTGCTTGTGTTGAAAGCGCTGATGCAGTTCCTGCGTTGTTGTGGCTATTGAAGAATGGAAGCCCAAATGGGAAGGAGATTGCAGCTAAGACCTTGAATCACTTAATTCATAAATCTGATACAGCAACTATCAGTCAGCTTACAGCATTATTGACCAGTGATCTACCTGAATCTAAGGTTTATGTTTTAGATGCTTTGAGGAGTATGCTTTCTGTTGTTTCTCTTAGTGACCTTTTACATGAAGGTAGTGCTGCTAGTGATGCGATCGATACAATGATAAAATTATTGAGCTGCACAAAGGAAGAAACTCAGGCAAAGTCAGCATCAGCTTTGTCAGGAATTTTTGAAACACGGAAAGATGTGCGAGAAAGTAAAATTGCTGTTAAAACTCTTTGGTCAGCCATGAAGTTGCTTAATGTTGAATCTAGAAGTATCTTAGTGGAGTCCTCACGCTGCCTAGCTGCAATATTTCTTTCCATCAAAGAGAACAGGGAGGTAGCTATTAATGCGAGAGATGCATTATCCTCCCTAGTTGCACTAGCTAGCTCTTCAGTTTTGGAGGTAGCAGAGATGGCAACATGTGCTGTGGCAAATCTTCTTTTGGATAGTGAAGTTGCTGAGAATGCTGTTGTGGAGGAAGTTATTTTGCCTGCTACCAGAGTATTGTGTGAAGGCACAAAATATGGAAAAACACATGCAGCAGCAGCAATTGCTCGCCTTTTGCATTCTAGGCAAGTTGATTGTGCTGTAAATGATTGTGTGAATCGTGCTGGAACTGTCCTTGCATTAGTTTCTTTCTTAGATTCTGCTATTGATGAACCTGTTGCAACAACAGAGGCTCTAGAAGCACTTGCCATTCTGTCAAGGTTGAAAGAGACCACTGCAATTAGTAAACCTGCTTGGATGATCTTGGCCGAATTTCCTAAAAGCATAAGCCCAATAGTTCTGTCAATTTCCGATTCAACACCAGTGTTGCAGGATAAAGCTATTGAAATATTATCTCGATTATGTAAGGATCAGCCTTCTGTGTTAGGAGAGAATGTTGCTACTGCATCTGGATGTATATCTTCAATAGCTAAGAGGATAATCAATTCCACTTCTACAAATGTGAAGGTCAAAATTGGGGGAGCTGCAATTCTGATTTGTGCTGCTAAAGAAAATCATCAAAGGCTTGTGGAGGATCTAAATTTATCAAACTTGTGTGCAGATCTTGTACAGTCACTTGTTGATATGGTTATTTCTTCACAGGCTACTTTGATCAATCAGGACGATGTCAACAAGGAACTCATCAGCATTTGCAGGCATACAAAAGACGCCAATGATGGTAAATTGACAAACAGCATATCTGGTGCAGATGTAGCTTTATGGTTACTCTCTGTTCTTGCTTGTCATGACGAAAAATGTAGAATTTCAATAATGGAGGCTGGAGCGATTGAGATTTTCACTGACATGATTGCAAATTTTTCCTCACAGTACAATCAGATTGACGATAAAGAAGATAGCAGCATGTGGATTTGTGCTATGTTGTTGGCAATATTATTTCAAGATAGGGATATCATACGAGCACATGCAACAATGAAATCTATACCAGCCCTTGCCAATTTATTGAAGTCAGAGGAATCAGCAAACAAATATTTTGCTGCACAGTCAATAGCTAGCTTAGTCTGTAACGGTAGCAGGGGAACTCTTCTATCTGTTGCAAATTCTGGGGTGGCAGGTGGACTTATCTCCTTGCTTGGCTGTGCTGATGTTGATATACGGGATCTTCTGGAATTGTCTAATGAATTTTCATTGGTGCCTTTTCCCGATCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATTAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCCCTAGTTGATCTGCTCAAACCGATTCCAGATCGCCCAGGAGCACCATTTCTAGCACTAGGGATTTTGACTCAGCTTGCTAGAGATTGCCCATCAAATAAGATTGTAATGGTAGAGTCTGGGGCCATAGAGGCACTTACTAAGTATCTTTCACTGGGTCCACAAGATGCCATTGAAGAAGCTGCTACAGATCTGTTAGGTATTTTGTTTAGCAATGCTGAGATAAGGAGACACGAGTCAGCCTTTGGTGCTGTTACTCAACTCGTAGCCGTGTTACGTTTAGGAGGAAGAGCTGCAAGGTATAGTGCTGCTAAAGCCTTGGAAAATTTATTCTCGGCTGACAACATTAGAAATGCAGAGACTGCTCGGCAAGCTGTTCAACCCTTGGTGGAGATTCTTAATACTGGTCTAGAGAGAGAGCAACATGCTGCGATTTCTGCGTTAGTTAAGTTACTGAGTGAAAATCCTGCAAGAGCACTTGCTGTTGCTGATGTTGAGACGAATGCCATTGATGTTCTTTGCAAAATTCTTTCATCAGATTGTTCAATGGATCTCAAAGGGGATGCTGCTGAATTATGCTGCGTTCTTTTTGGAAATACAAGGATTCGATCCACAGTGGCTGCTGCACGGTGTGTTGAACCTCTGGTCTCTCTCCTTGTAACTGAGTTTAGTCCTGCTCATCATTCAGTTGTACGGGCATTGGATAGGCTTGTTGGCGATGAGAAATTGGCTGATTTGGTTGTTGCACGTGGTGCAGTTGTTCCTCTCGTTGGCCTACTTTTTGGTACGAACTTTGTACTTCATGAGGCCATTTCCAGAGCTCTGGTCAAGTTAGGAAAAGATCGACCTTCTTGTAAAATGGAAATGGTGAAAGCTGGTGTCATTGAATGCATACTTGACATCCTTCATGAAGCACCTGATTATCTCTGTGCAGCTTTTGCTGAATTGTTACGTATATTGACCAACAATGCTAGCATAGCCAAAGGATCATCAGCTGCTAAAGTGGTTGAACCCCTGTTCTTTTTGCTAACAAGACAAGAATTTGGGCCCAATGGACAACATAGTGTGTTGCAGGTTTTGGTTAATATCTTAGAGCATCCGCAGTGCCGTGCTGATTATAGATTAACTTCTCACCAAACTATTGAACCACTCATCCCCTTGCTTGATTCTCAAACAGATACAGTGCAGCAGTTGGTTGCCGAGCTTCTATCCCATCTACTTTTAGAAGAAGACCTTCAGAAAGATCCAGTGACACAGCAAGTAATTGGCCCTCTTGTGCGAGTTCTTGGTTCAGGCATGCAAATATTGCAGCAGAGAGCTTTGAAGGCCCTTGTCAGTATTGCAGTTGTATGGCCCAATGAAATTGCAAAAGAGGGTGGTGTTATTGAAATTTCCAAAGTGATATTGCAAGCCGACCCTTCCATTCCTCATGTTTTATGGGAATCTGCTGCCTCTGTTTTGGCAAGTATTCTGCAATTTAGTTCGGAATTCTACTTGGAAATTCCTGTTGCTGTTTTGGTAAGGTTGCTTCAATCTGGATCAGAGAGCACAATTAGTGGTGCATTAAATGCTCTTCTTGTGTTGGAAAGTGATGATGAAACTAGTGCAGCCGCGGAGGCAATGGCTGAAAGTGGTGCCATAGAGGCTCTCCTAGAGCTCCTTACATCTCATCAGTGTGAGGACACTGCTGCAAGACTCTTAGAAGTATTGCTTAACAATGTAAAGATTAGAGAAACAAAAGTCACTAAATCAGCCATCTTACCATTATCCCAGTACCTTTTGGATCCTCAAACTCAAGCACAGCAAGCGAGGTTATTAGCAACTTTGGCTCTTGGTGATCTATTCCAGAATGAGAGTCTTGCTCGGACAGCTGATGCAGCCTCAGCTTGTCATGCTTTAGTGAATGTGCTTATAGACCAACCCACTGAAGAAATGAAAGTTGTTGCCATATGTGCTTTGCAGAACCTTGTGATGCACAGTCGAGCAAATAAAAGAGCAGTTGCAGAGGCCAGTGGGGTTCAGGTTATACTGGATCTGATTGGTTCAAGTGATCCTGAAACATCTGTTCAGGCTGCAATGTTTATTAAACTTCTCTTTTCAAATCATACTATTCAAGAGTATGCCGTTAGTGAAACAGTCAGGGCAATAACTGCTGCTATCGAAAAGGATTTATGGGCTACTGGAGCGGTGAACGACGAGTATCTTAAAGCCTTAAATTCTCTATTTAGCAACTTCGCACACCTGAGAGCAACTGAACCAGCAACACTTAGCATTCCACATCTGGTTACATCCTTAAAGTCAGGTTCAGAGGCCACTCAGGAAGCTGCGTTGGATGCACTTTTTCTGCTCAGGCAAGCTTGGTCAGCATGCCCAGCAGAAGTTTCAAGAGCTCAGTCCATAGCAGCCGCAGATGCTATTCCTATGTTACAGTACTTACTCCAGTCTGGCCCACCTCGGGTTCATGAGAAGGCAGAGTTTCTGTTGCAGTGTTTGCCGGGTACATTAGTGGTAATTATCAAGTGCGGTAATAATATGAAGCAGTCTGTTGGAAACCCAAGTGTATACTGCAAGCTTACACTTGGAAATAATCCTCCAAGGCAAACCAAGGTGGTCTCAACCGGCCCTAACCCAGAGTGGGATGAGAGTTTCTCATGGTCCTTCGAGAGTCCTCCAAAAGGCCAGAAGCTTCAAATTTCTTGCAAAAACAAGAGTAAAATGGGAAAGAGTTCATTTGGGAAAGTGACGATCCAGATTGAGCGGGTGGTGATGCTGGGGACAGTATCGGGAGAGTACACACTGTTGCCAGAAAGTAAAAGTGGCCCTTCAAGAAATTTAGAAATAGAATTTCAATGGTCTAACAAATGA 6330 0.4281 MGLRERSSSGMEDTDGTLASIAQCIEQLRHSSSSMQEKAYSLKQLLELIDTRENAFSAVGSHSQAVPVLVSLLRSGSLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSSSEEGQVAAAKTIFAVSQGDAKDHVGSKIFSTEGVVPVLWEQLQKGLKSGSVVDSLLTGALKNLYSSTERFWNSTIQAGGVDILLKLLTTGQSSTLANVCFLLGCMMMEDASFCSKVLTADVTKQLLKLLGPDNDAPVRAEAAGAIKSLSAQCQDARKEIANYNGIPALINATIAPSKEFMQGEYAQAIQENAMCALANISGGLSYVISSLGQSLESCSSPTQTSDTLGALASALMIYDDKAESTRASDPLAVEQTLLEQFKPHSPFLVQERTIEALASLYGNPILSLKLANSDAKRLLVGLITMAANEVQDELLKALLTLCNSECSLWRALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWSITAAGGIPPLVQILESGSAKAKEDSATILRNLCDHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLSVVSLSDLLHEGSAASDAIDTMIKLLSCTKEETQAKSASALSGIFETRKDVRESKIAVKTLWSAMKLLNVESRSILVESSRCLAAIFLSIKENREVAINARDALSSLVALASSSVLEVAEMATCAVANLLLDSEVAENAVVEEVILPATRVLCEGTKYGKTHAAAAIARLLHSRQVDCAVNDCVNRAGTVLALVSFLDSAIDEPVATTEALEALAILSRLKETTAISKPAWMILAEFPKSISPIVLSISDSTPVLQDKAIEILSRLCKDQPSVLGENVATASGCISSIAKRIINSTSTNVKVKIGGAAILICAAKENHQRLVEDLNLSNLCADLVQSLVDMVISSQATLINQDDVNKELISICRHTKDANDGKLTNSISGADVALWLLSVLACHDEKCRISIMEAGAIEIFTDMIANFSSQYNQIDDKEDSSMWICAMLLAILFQDRDIIRAHATMKSIPALANLLKSEESANKYFAAQSIASLVCNGSRGTLLSVANSGVAGGLISLLGCADVDIRDLLELSNEFSLVPFPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGILTQLARDCPSNKIVMVESGAIEALTKYLSLGPQDAIEEAATDLLGILFSNAEIRRHESAFGAVTQLVAVLRLGGRAARYSAAKALENLFSADNIRNAETARQAVQPLVEILNTGLEREQHAAISALVKLLSENPARALAVADVETNAIDVLCKILSSDCSMDLKGDAAELCCVLFGNTRIRSTVAAARCVEPLVSLLVTEFSPAHHSVVRALDRLVGDEKLADLVVARGAVVPLVGLLFGTNFVLHEAISRALVKLGKDRPSCKMEMVKAGVIECILDILHEAPDYLCAAFAELLRILTNNASIAKGSSAAKVVEPLFFLLTRQEFGPNGQHSVLQVLVNILEHPQCRADYRLTSHQTIEPLIPLLDSQTDTVQQLVAELLSHLLLEEDLQKDPVTQQVIGPLVRVLGSGMQILQQRALKALVSIAVVWPNEIAKEGGVIEISKVILQADPSIPHVLWESAASVLASILQFSSEFYLEIPVAVLVRLLQSGSESTISGALNALLVLESDDETSAAAEAMAESGAIEALLELLTSHQCEDTAARLLEVLLNNVKIRETKVTKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNESLARTADAASACHALVNVLIDQPTEEMKVVAICALQNLVMHSRANKRAVAEASGVQVILDLIGSSDPETSVQAAMFIKLLFSNHTIQEYAVSETVRAITAAIEKDLWATGAVNDEYLKALNSLFSNFAHLRATEPATLSIPHLVTSLKSGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPMLQYLLQSGPPRVHEKAEFLLQCLPGTLVVIIKCGNNMKQSVGNPSVYCKLTLGNNPPRQTKVVSTGPNPEWDESFSWSFESPPKGQKLQISCKNKSKMGKSSFGKVTIQIERVVMLGTVSGEYTLLPESKSGPSRNLEIEFQWSNK 2109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06357 2109 Gene3D - 1322 1604 IPR011989 -
Mepo3g06357 2109 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1152 1196 IPR000225 GO:0005515
Mepo3g06357 2109 Gene3D - 609 827 IPR011989 -
Mepo3g06357 2109 SUPERFAMILY ARM repeat 614 1116 IPR016024 -
Mepo3g06357 2109 SMART arm_5 1565 1604 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1140 1183 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 51 93 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 688 729 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1521 1563 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1689 1727 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1395 1435 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1437 1477 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 604 644 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1185 1226 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 525 565 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1772 1813 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 226 267 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 269 318 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 483 523 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 94 134 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1354 1394 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1815 1855 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 1267 1308 IPR000225 GO:0005515
Mepo3g06357 2109 SMART arm_5 993 1043 IPR000225 GO:0005515
Mepo3g06357 2109 CDD C2 1990 2088 - -
Mepo3g06357 2109 Pfam C2 domain 1988 2081 IPR000008 -
Mepo3g06357 2109 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1336 1570 - -
Mepo3g06357 2109 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1988 2109 - -
Mepo3g06357 2109 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 494 536 IPR000225 GO:0005515
Mepo3g06357 2109 SUPERFAMILY ARM repeat 1142 1374 IPR016024 -
Mepo3g06357 2109 SUPERFAMILY ARM repeat 1361 1613 IPR016024 -
Mepo3g06357 2109 ProSiteProfiles C2 domain profile. 1969 2086 IPR000008 -
Mepo3g06357 2109 SMART C2_3c 1989 2085 IPR000008 -
Mepo3g06357 2109 Coils Coil 255 282 - -
Mepo3g06357 2109 Gene3D - 11 363 IPR011989 -
Mepo3g06357 2109 Gene3D - 364 608 IPR011989 -
Mepo3g06357 2109 Gene3D C2 domain 1988 2109 IPR035892 -
Mepo3g06357 2109 Pfam Armadillo/beta-catenin-like repeat 484 523 IPR000225 GO:0005515
Mepo3g06357 2109 Pfam Armadillo/beta-catenin-like repeat 62 92 IPR000225 GO:0005515
Mepo3g06357 2109 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 5 2109 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Mepo3g06357 2109 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1987 2106 IPR035892 -
Mepo3g06357 2109 SUPERFAMILY ARM repeat 1535 1986 IPR016024 -
Mepo3g06357 2109 Gene3D - 833 1321 IPR011989 -
Mepo3g06357 2109 Gene3D - 1610 1987 IPR011989 -
Mepo3g06357 2109 SUPERFAMILY ARM repeat 21 729 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06357 Mepo-Chr3 77642756 77651838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06357 446 578 U-box Gene Family AT2G23140 40.000 1.23e-11 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06357 - - gmx:100816765 3492.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04299 2 51632221 51642179 Mepo3g06357 3 77642756 77651838 PCT