Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06353 ATGACTTCTTCAGCAGTGGAACCCTGCACTTTTGAGGATATGCAGGTGGACCTTGAGAAGAATGTTCAGCAGGATGTAAGGTCTCAGTGGGTGCTTAATGCACCTGAGCCCCCAAGTCCTTGGCATGTGGCTGTAGATTCTTTAAGGAAAACAGTCTCCAGCTATAGAGAAAAAATTTCTTCTCTAAGTGATCAATCATGTGGCACACTCCTACTTTCAGTTTTGCAGGTTATTTTTCCTATTCTTGTTTGGGGCAGAAGCTACACTGCTGCTAAGTTTAGGAAAGATTTTCTTGCTGGCCTCACTATTGCTAGTCTTTGTATTCCTCAGAGCATAGGATATGCAACATTGGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTTCCACCGCTTATCTACGCTGTAATGGGAACATCAAGAGAAATAGCAATTGGTCCTGTGGCCGTGGTTTCGTTGCTGTTATCATCAATGGTTCAAAAATTAGTAGACCCTTCTACTGATCCAATTGGTTATACAAAGCTCATTTTTCTTGCAACTCTCTTTGCTGGTATCTTTCAAACTTCGTTTGGACTATTCAGGTTGGGGTTCCTTGTGGATTTTCTGTCACATGCTGCAATTGTTGGATTTGTAGCAGGAGCTGCCATTGTGATTGGTCTTCAACAGTTAAAGGGACTGTTTGGAATCACACATTTTACCACCAAAACAGACATAATCTCTGTCTTGAAAGCTGTTTGGGAAGCATTTCATAACCCTTGGAACCCTCATAACTTTATCCTGGGTGGCTCATTCTTGGTGTTCATCCTAACTACTAGATTTCTGGGTAAAAGGAAGAAGAACCTGTTCTGGTTGGCATCAATTGCACCACTTGTATCAGTTATACTATCAACTCTAGTTGTTTTTCTAACACGGGCCGATAAAAATGGAGTTAAAATTGTGAAACATGTCAAAGGAGGACTCAATCCAAGTTCCATCAATCAGTTAGACTTTAACAGTCCCCATGTTATAGATGTTGCCAAAATTGGACTTATTGTTGCTGTTGTTGCCCTTACCGAATCTGTTGCTGTTGGACGATCTTTTGCATCCATCAAAGGATACCAACTTGATGGAAACAAAGAGATGATGTCAATAGGCTTCACAAACATCATAGGATCTCTCACCTCCTGCTATGTTGCAACTGGTTCATTCTCTCGAACCGCTGTTAATTATGCTGCTGGATGTGAAAGTTTAATATCAAACATTGTGATGGCAATTACAGTGATGATATCACTGCAATTTTTTACAAATCTATTGTATTATACACCAATTGCTATCATTGCTTCAGTGATCCTTTCTGCTCTACCTGGACTCATAGACATAAATGAAGCTTACAAAATTTGGAAGGTTGATAAGCTTGACTTTCTTGCTTGTGCTGGTGCATTCTTTGGTGTACTCTTTGCTTCTGTGGAGATTGGTCTTCTAGTGGCGGTTGTGATATCATTTACAAAGATAATTTTGATATCAATTCGACCAAGCACAGAAACTTTAGGAAAACTTCCTGGAACTGATCTGTTCTGTGATGTTGATCAGTATCCTATGGCAATTCAGATTCCTGGGGTTATGATAATACGTATGAAATCTGCATTGCTTTGCTTTGCAAATGCCAATTTCGTTAAAGAAAGGATCATCAAATGGGTCACTCGAAAAGGATTGGAAGATGACAAGGGAAATTCAGAAAGCACCATTCAACTTGTAATTCTCGACACCTCGAATTTGGTGAACATTGACACCACCGGAATTGCTTCTCTAGAGGAACTGTACAAGTGTTTGTCTTCACATGGGAAGCAGTTGGTCATTGCAAATCCGAGGTGGCAGGTGATACACAAGCTAAAGGTGTCGAACTTTGTCAGCAAAATAGGTGGCAGAGTGTATCTCACCGTTGAAGAAGCTGTTGCTAGCTGCAAGAGTAATCAGTTCTAA 1965 0.4046 MTSSAVEPCTFEDMQVDLEKNVQQDVRSQWVLNAPEPPSPWHVAVDSLRKTVSSYREKISSLSDQSCGTLLLSVLQVIFPILVWGRSYTAAKFRKDFLAGLTIASLCIPQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLVDPSTDPIGYTKLIFLATLFAGIFQTSFGLFRLGFLVDFLSHAAIVGFVAGAAIVIGLQQLKGLFGITHFTTKTDIISVLKAVWEAFHNPWNPHNFILGGSFLVFILTTRFLGKRKKNLFWLASIAPLVSVILSTLVVFLTRADKNGVKIVKHVKGGLNPSSINQLDFNSPHVIDVAKIGLIVAVVALTESVAVGRSFASIKGYQLDGNKEMMSIGFTNIIGSLTSCYVATGSFSRTAVNYAAGCESLISNIVMAITVMISLQFFTNLLYYTPIAIIASVILSALPGLIDINEAYKIWKVDKLDFLACAGAFFGVLFASVEIGLLVAVVISFTKIILISIRPSTETLGKLPGTDLFCDVDQYPMAIQIPGVMIIRMKSALLCFANANFVKERIIKWVTRKGLEDDKGNSESTIQLVILDTSNLVNIDTTGIASLEELYKCLSSHGKQLVIANPRWQVIHKLKVSNFVSKIGGRVYLTVEEAVASCKSNQF 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06353 654 ProSiteProfiles STAS domain profile. 545 649 IPR002645 -
Mepo3g06353 654 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Mepo3g06353 654 PANTHER SULFATE TRANSPORTER 68 649 IPR001902 GO:0016020|GO:0055085
Mepo3g06353 654 Coils Coil 45 65 - -
Mepo3g06353 654 CDD STAS_SulP_like_sulfate_transporter 526 635 - -
Mepo3g06353 654 FunFam Sulfate transporter 31 505 652 - -
Mepo3g06353 654 SUPERFAMILY SpoIIaa-like 530 649 IPR036513 -
Mepo3g06353 654 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020
Mepo3g06353 654 NCBIfam sulfate permease 80 637 IPR001902 GO:0016020|GO:0055085
Mepo3g06353 654 Gene3D STAS domain 505 653 IPR036513 -
Mepo3g06353 654 Pfam STAS domain 526 645 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06353 Mepo-Chr3 77613117 77620703 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06353 23 649 Inorganic Solute Cotransporters AT5G10180 67.357 0.0 880
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06353 K17469 - gmx:100781327 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06353 3 77613117 77620703 Mepo3g06353 3 77613117 77620703 ECH