Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06326 ATGTCTAATCCGAACCCAGATTCCCATCACACTACCCAGATACTTAATCCACAGCAAAATCCAACTAATACCCCCGACCCTCAAGTTCCGCTTCGGAATCTATCCTTGGTTCAGACAAGCATCGATTCTCTCCGAACCCTCCTGTCCCAATCCATCACCACCAACGCTCCTGTCACCAACGATCAATTAACCACCGTCTCCAACCAAATCTTTGCCGCCCTCCACCATACCATAGTCAACGCTGCCGCCCTCGTTCCCGGCGCCTCCGTCACCTTCGATTCTGTCAACAACAACCCCCTTGCTGCCGTGGAAGATTCCGATTGCGAAATTGTGGAGCTCGACGCCATGGAATTGCTTGCTGAACATCTCCACTTCTGCGAGATATGCGGCAAAGGCTTCAAGCGCGACGCGAATCTCCGGATGCACATGAGAGCCCATGGGAATCAATTCAAGACGCCGGAAGCTTTAGCGAAGCCTTTAACAGTGGCCCGTCGTCCAACGTGGTTCTCGTGTCCGTTTGAAGGATGTAACAGAAACAAGAAGCATACGAAATTCAAAGCACTGAAATCGTTGATATGTGTGAAGACTCATGTCAAGAGGAGTCATTGTCCGAAGATGTATTCATGTAATCTTTGTCGTAAGAAGAATTATTCGATGCTTTCGGATTTGAAGAGTCATATGAGGCAATGTGGTGAATCTAAGTGGAAGTGTTCTTGTGGAAGTACTTTTTCTAGGAAGGATAAGTTGTTTGGACATGTTGCTTTGTTTGAGGGTCATATGCCAGCTGTTGTGTTGGAAGATGGAGAGAAAGGGAAGCAAGTTGTGGCTGAGGAGAATGAAGCTCCTATGGAGATGGCATCAAGTAAAGACGATGAAATTGGTATGGATGAAGAGTTCTTTCATGATTTTGGGTCTATTGATAACTATTGTTTGGAGGAAGTTTTGGGATTTCGTAGTCGCTAG 963 0.4663 MSNPNPDSHHTTQILNPQQNPTNTPDPQVPLRNLSLVQTSIDSLRTLLSQSITTNAPVTNDQLTTVSNQIFAALHHTIVNAAALVPGASVTFDSVNNNPLAAVEDSDCEIVELDAMELLAEHLHFCEICGKGFKRDANLRMHMRAHGNQFKTPEALAKPLTVARRPTWFSCPFEGCNRNKKHTKFKALKSLICVKTHVKRSHCPKMYSCNLCRKKNYSMLSDLKSHMRQCGESKWKCSCGSTFSRKDKLFGHVALFEGHMPAVVLEDGEKGKQVVAEENEAPMEMASSKDDEIGMDEEFFHDFGSIDNYCLEEVLGFRSR 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06326 320 SMART c2h2final6 124 146 IPR013087 -
Mepo3g06326 320 SMART c2h2final6 169 202 IPR013087 -
Mepo3g06326 320 SMART c2h2final6 207 228 IPR013087 -
Mepo3g06326 320 SUPERFAMILY beta-beta-alpha zinc fingers 120 147 IPR036236 -
Mepo3g06326 320 Gene3D Classic Zinc Finger 194 262 - -
Mepo3g06326 320 Pfam Zinc-finger of C2H2 type 125 144 - -
Mepo3g06326 320 FunFam Zinc finger protein 574 124 147 - -
Mepo3g06326 320 ProSiteProfiles Zinc finger C2H2 type domain profile. 124 151 IPR013087 -
Mepo3g06326 320 ProSitePatterns Zinc finger C2H2 type domain signature. 126 146 IPR013087 -
Mepo3g06326 320 Gene3D Classic Zinc Finger 124 147 - -
Mepo3g06326 320 MobiDBLite consensus disorder prediction 1 29 - -
Mepo3g06326 320 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 102 291 IPR044300 GO:0010044|GO:0010447
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06326 Mepo-Chr3 77342676 77344130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06326 109 267 C2H2 Transcription Factor Family AT1G34370 56.805 3.77e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo3g06326 zf-met 0.0026 CL0361