Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06311 ATGGAAGAACGTTATGAAATTATTAAAGGTATTGGGTCAGGAAATTTTGGGGTAGCAAAGCTTGTAAGGGAGAGACAAAGTGGTAAACTATATGCTGTCAAAATCATTGAGAGAGGCCTTAAGATTGATGAGCATGTTCAACGGGAGATCATAAATCATAGATCCTTGAAGCATCCCAATATCATTAGATTTAAAGAGGTTCTATGTACTCCAGCTCATCTAGCTATAGTGATGGAGTATGCTGCAGGAGGAGAACTATTTGAAAGAATATGCAGTGCTGGTAGATTTTGTGAAGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGAGTCAGCTATTGTCATTCAATGGAAATTTGCCACAGAGATCTCAAGCTAGAAAATACACTTTTAGATGGAAGCTCTTCACCACAACTCAAAATATGCGACTTTGGTTACTCCAAGTCTTCTGTTCTGCATTCCCAACCTAAATCTACTGTGGGAACTCCCGCATATATTGCCCCAGAGGTTTTTTCAAGGAAAGAATATGATGGAAAGGTTGCTGATGTTTGGTCTTGTGGGGTTACCTTGTATATAATGCTAGTTGGTGGTTATCCTTTTGAAGATCCGGACGATCCACGAAATTTCAGAAAGACAATTGAGAGAATTCTTAAGGTTCATTATTCTATTCCCGACTATGTTCGTGTCTCTAAAGATTGTAGACACCTTTTATCTCAAATATTTGTGGCCAACCCTGAAAAGAGAATCACCATTCCAGAAATTAAAATGCACCCATGGTTTCTTAATAAATTGCCAGTGGAATTTGTGGAGGAAGGGAAAAATAACAAGTTAGAAAATGATGTGAATGGTGTGAATGATTCATCTCAAAGCATTGAGGAAATACTGTCCATAATTCAAGAGGCAAGGAAACCAGTTGAGGGCCCAAAAATTGATAGTCAATTTGTTGGAGGAGAAATGGATTTTGATGAGATGGATGCAGATGATGATTTTGATAATGATATAGAAACTAGTGATGATTTTGATTTTGTTTGTGATATGTGA 1044 0.3755 MEERYEIIKGIGSGNFGVAKLVRERQSGKLYAVKIIERGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPAHLAIVMEYAAGGELFERICSAGRFCEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSSPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVFSRKEYDGKVADVWSCGVTLYIMLVGGYPFEDPDDPRNFRKTIERILKVHYSIPDYVRVSKDCRHLLSQIFVANPEKRITIPEIKMHPWFLNKLPVEFVEEGKNNKLENDVNGVNDSSQSIEEILSIIQEARKPVEGPKIDSQFVGGEMDFDEMDADDDFDNDIETSDDFDFVCDM 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06311 347 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06311 347 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06311 347 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06311 347 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Mepo3g06311 347 FunFam Serine/threonine-protein kinase SRK2E 81 269 - -
Mepo3g06311 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Mepo3g06311 347 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Mepo3g06311 347 PANTHER SERINE/THREONINE KINASE 3 287 - -
Mepo3g06311 347 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Mepo3g06311 347 SUPERFAMILY Protein kinase-like (PK-like) 3 272 IPR011009 -
Mepo3g06311 347 CDD STKc_SnRK2 4 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06311 Mepo-Chr3 77204171 77207227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06311 4 271 CBL-interacting serine-threonine protein kinases AT4G24400 42.599 1.61e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Mepo3g06311 Pkinase 6.3e-70 CL0016