Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06299 ATGAAATCATCCCAATTGTTCTTCCTTGTGGTCATACTATTCCATTCATACACTGATGCACAATCACCACCAACATCATATCCACCATTAGGAAAAACAACCTTATTAAAAGACAACCTTAAAGCAACAATGATCATCATGTTTATTGGTTTTTTATCCGCCTTAATACTCATGCCCTTATTTGCACTCATCCTCCGCCATTGCTCTTCCTACGGCCACAACCGCCTTAATCCCATCACCGCTGCCGTCGACCTATTCCGCCGTGAATTCAACCGTCAAATCATGGACAAATGCCCTGTCCTCGTTTACTCCGCCGTGAAAGACCACAAAATAGGTAAAGCCGCACTTGAATGTGTTGTTTGCTTGAATGAGTTTCAAGACAATGATAAAATAAGGTTGTTGCCAAAATGTCATCATGTTTTTCACCAAGATTGTATTGATGTTTGGTTATTATCTCATATGGATTGTCCTGTTTGTCGTTCCAAACTCACCCCTGATGTTCCCGACATTGCAATCCCTATCCCCGCCGCTACGGAATCAACAGAGCAACACCGTTAG 558 0.4229 MKSSQLFFLVVILFHSYTDAQSPPTSYPPLGKTTLLKDNLKATMIIMFIGFLSALILMPLFALILRHCSSYGHNRLNPITAAVDLFRREFNRQIMDKCPVLVYSAVKDHKIGKAALECVVCLNEFQDNDKIRLLPKCHHVFHQDCIDVWLLSHMDCPVCRSKLTPDVPDIAIPIPAATESTEQHR 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06299 185 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 166 IPR013083 -
Mepo3g06299 185 SMART ring_2 118 159 IPR001841 -
Mepo3g06299 185 FunFam E3 ubiquitin-protein ligase ATL6 79 166 - -
Mepo3g06299 185 SUPERFAMILY RING/U-box 96 168 - -
Mepo3g06299 185 PANTHER RING FINGER DOMAIN-CONTAINING 35 163 - -
Mepo3g06299 185 CDD RING-H2_EL5-like 117 160 - -
Mepo3g06299 185 Pfam Ring finger domain 117 160 IPR001841 -
Mepo3g06299 185 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06299 Mepo-Chr3 77079891 77080448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06299 40 179 Rapid Response to Elicitors AT3G05200 39.310 9.41e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06299 K10664 - csv:101212548 145.591