Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06286 ATGTTAGGAGAAGAGGATAAGGAGAAAAAACTCTCCATCAGGAGAACCTATTCACGTTCAGTTTCATGGACAGATCGTTCTCCAAATAGCCATAAACCACCACTAGGAAATAGTAAACCAAGACCACTTTTACCACCTCTTCAACCTCTTTCAATCAATAAACGTAGCGTTGAAGAATGGCCAAGTGCTGGATCTGATGATCTTGGTGTTTGGCCTCTTCCACAAACTCCAAGAGGGTCTATAACAATCAATGAACCAACCAAAGATTTTCAGTTCAAAAGAGATAAACTAGCTTTCTTTGACAAAGAGTGTTCTAGAATTGCTGAACATATTTACTTGGGAAGTGACACGGTAGCCAAAAACCATGAACTTCTCAGAGAAAAAGGAATAACACATGTGCTTAACTGTGTTGGTTTTGTTTGTCCTGAGTATTTCAAAAGTGATTTTGAGTACAAAACACTTTGGTTGCAGGACAGTCCAACTGAGGATATAACATGTATTCTCTATGATGTGTTTGATTACTTTGAGGATGTTAGAGAACAAGGTGGTCGTGTTCTTGTTCACTGTTGTCAAGGGGTTTCGCGATCAACGGCTTTGGTGATAGCTTATCTCATGTGGAGGAAGGGACAGAGCTTTGAAGATGCTTTTCAGTTTGTGAAAACTGCAAGGGGAGTCACAAATCCAAACATGGGTTTTGCTTGTCAACTCTTGCAGTGTCAGAAACGTGTACATGCTATGCCTGCAAGTCCTAATTCTGTTTTAAGGATGTATCGAATGGCTCCTCACTCTCCTTATGATCCTCTTCATCTTGTTCCTAAGATGGTTAACCAACCAGGTTCACTAGCACTTGATTCACGCGGCGCTTTTATTGTTCATGTTCCTTCTGCTATTTATGTGTGGATTGGGAAAAATTGTGACTTGGTTATGTCATGCAACGCAAAGAGTGCGGCTTTTCAGGTTGTGCGCTATGAGGGAGCAAAGGGTCCGATTTGGAGCATCCGTGAAGATCAAGAATCAGCTGAGTTTTGGATTGCTCTTTCTGATCAGCAACGTTTGTCAGGTGATTCTGATAAACAACTGGTTTTGCCTACTGAAAAGATGGAGATTGGTCTAAGAAAAGTTGATGCTTATGATTTGGATTTTGAGATTTTCCACAAGGCAATTTCTGGTGGGGTTGTTCCGCCTTTTTCTGTAGCTAATTCTGGATTGGAAACTTGTCTTCCTGCTGCAGAACATGGTTGGGCAAGATTGAGGAGGAAATTTGCTAGTGGTGTCATGAAAGAAATATTAACATCCCCCAAATGGAAGTGTGATGTGATTATGGAGGAAGAAAAACAAGACTTTGCAGCTGATGATGATCCCTTGTCAGCGTCGCCATCATCAAGTCATCCAAGTGACTGTGGTTCTCCAGATTCCTTTGAATGTTATCCCAACAGCATAAGCAAGGCAAAAGATACTGATGAAGCCATGGACTTGTCTGAATCTGATTCTGGTGTTGCTTCTTTGATGCCACTATCTCCTTGTGGCACTTCTTTTCCTTGTTGTTTTCCAAGCAGCAGCCCAAGATTCAATTCCAAGTCGCCAACACTTTCACCTTCAAGTTCTGATTATGCAAGTTCATTTACATTTTCGCCTTCCTCTACCAATTGGTCTGACTTGTCATTCATGTCTTCTCGGCAGCCATCACCATCCGGCCAGGAATCAATTGAACCCTTTTATGTTAAAGACGTGTCTTTCTCAACAAGTTCTACTTTACTTAACAAAGAAGTTCTCTCTTCACCTTCGGAGTCATTTTCGACTGATGATACTTTAGGAGGGGAAAACTCCTATTTGTCATCGAAAGGATCTTTTTTCTCTATTGCTGAGCGTAGAGGGAGTAGTATACCGCCTCGGATGATGCTACCCTCAGTCAATGAATCCTCTAAGGTCCGTAAGAACCTGGAGGAATGCACCTACTAA 1959 0.4165 MLGEEDKEKKLSIRRTYSRSVSWTDRSPNSHKPPLGNSKPRPLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSITINEPTKDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLREKGITHVLNCVGFVCPEYFKSDFEYKTLWLQDSPTEDITCILYDVFDYFEDVREQGGRVLVHCCQGVSRSTALVIAYLMWRKGQSFEDAFQFVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSVLRMYRMAPHSPYDPLHLVPKMVNQPGSLALDSRGAFIVHVPSAIYVWIGKNCDLVMSCNAKSAAFQVVRYEGAKGPIWSIREDQESAEFWIALSDQQRLSGDSDKQLVLPTEKMEIGLRKVDAYDLDFEIFHKAISGGVVPPFSVANSGLETCLPAAEHGWARLRRKFASGVMKEILTSPKWKCDVIMEEEKQDFAADDDPLSASPSSSHPSDCGSPDSFECYPNSISKAKDTDEAMDLSESDSGVASLMPLSPCGTSFPCCFPSSSPRFNSKSPTLSPSSSDYASSFTFSPSSTNWSDLSFMSSRQPSPSGQESIEPFYVKDVSFSTSSTLLNKEVLSSPSESFSTDDTLGGENSYLSSKGSFFSIAERRGSSIPPRMMLPSVNESSKVRKNLEECTY 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06286 652 MobiDBLite consensus disorder prediction 455 471 - -
Mepo3g06286 652 MobiDBLite consensus disorder prediction 1 15 - -
Mepo3g06286 652 Pfam Dual specificity phosphatase, catalytic domain 111 241 IPR000340 GO:0008138|GO:0016311
Mepo3g06286 652 Gene3D Protein tyrosine phosphatase superfamily 83 245 IPR029021 -
Mepo3g06286 652 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Mepo3g06286 652 MobiDBLite consensus disorder prediction 16 34 - -
Mepo3g06286 652 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 223 IPR000387 GO:0016311|GO:0016791
Mepo3g06286 652 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 245 IPR029021 -
Mepo3g06286 652 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 245 IPR020422 GO:0006470|GO:0008138
Mepo3g06286 652 SUPERFAMILY Actin depolymerizing proteins 249 353 - -
Mepo3g06286 652 CDD DSP 104 238 - -
Mepo3g06286 652 PANTHER MKPA PROTEIN 14 646 - -
Mepo3g06286 652 SMART dsp_5 103 242 IPR020422 GO:0006470|GO:0008138
Mepo3g06286 652 Gene3D Severin 256 353 IPR029006 -
Mepo3g06286 652 MobiDBLite consensus disorder prediction 448 471 - -
Mepo3g06286 652 MobiDBLite consensus disorder prediction 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06286 Mepo-Chr3 76993223 76997241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06286 27 139 Protein tyrosine phosphatase (PTP) family AT3G55270 50.794 7.34e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06286 - - gmx:100775448 905.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g04190 2 50729686 50732098 Mepo3g06286 3 76993223 76997241 PCT