Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06279 ATGGGAAACAAAGGTGGATTTTTACGTTATGCAGATGGCGTTGACAAGTTGCTATTATTCTTTGGAACTTTGGGATGCATTGGTGATGGCATACAAACTCCACTCACTATGCTTGTTCTTGGCAGTTTGATAGATGATTATGCTCGTGGTGGTTCTGAACATAATGTGTCCATTCATACTATCAATAAGTATGCTCTCAAGCTACTTGGTATTGCCATTGGAGTTGCTTTATCTGCTTTTATTGTTGGAGTATGCTGGACAAGAACTGCAGAAAGACAAACTTCACGGATGAGGATTGAATATCTTAAATCAATCCTAAGGCAAGAAGTTGGTTTTTTTGACAAGCAAACTAACTCTTCTACAACCTTCCAAGTAATTGCCACCATAACTTCTGATGCTCAAACAATCCAAGACACCATGTCTGATAAGGTACCTAATTGTCTTGTTCACCTCTCAGCATTTTTCTCTAGCTTTATAGTGGCACTCTTCCTCTCTTGGAGACTTGCAGTAGCTGCTTTCCCATTTTCAATTATGATGATCATGCCAGCACTCATATTTGGAAATGCTATGAAAGAGCTGGGTGGTAAAATGAAGGATGCGTTCGGAGTTGCTGGTAGCATAGCAGAACAAGCAATCTCATCGGTTCGAACTGTTTACTCGTATGTAGGTGAGAAGCAAACACTTAAGAGGTTCAGTTCTGCTCTTGAAACATGTATGAAGCTTGGCATAAAGCAAGGTCAAACAAAGGGAGTGGTTATTGGAAGTTTTGGGTTGCTATATGCTACCTGGGCATTCCAATCTTGGGTTGGAAGTGTTCTGGTTAGGACAAAAGGAGAAAAGGGTGGCAAGGTGTTTTGTGCCGAAATATGTATTATTTGGGGAGGATTGTCTCTGATGAGTGCACTACCAAATCTGGCTTCCATATTAGAGGCGACAATAGCAGCTACCCGGATTTTTGAGATGATCGAACGAAAACCAACCATAAACTCTACCAAAGAAAAAGGAAGAATTTTGAAGCATACAAGAGGAGAGATTACATTTAAAGATGTTGAGTTTAGTTACCCTTCAAGGCCAGATACACTGATTCTCCAAGGACTCAATCTTAAAGTTCAGGCATGTAAAACAGTAGGCCTAGTTGGAGGAAGCGGTTCTGGCAAATCTACTATAATCTCTTTGCTTGAAAGGTTCTATGATCCTACACGTGGTGCGATATTACTTGATGGTTTTGATATAAAAAGATTACACCTAAAGTGGTTTAGGTCCCTGATAGGATTGGTAAATCAAGAGCCAATTCTCTTTGCAACATCAATAAGAGAGAACGTTCTATTTGGCAAGGAAGGAGCTTCAATGGAAGATGTCATAACCGCGGCAAAAGCAGCAAATGCACATGATTTCATTATTAAGCTTCCTAATGGATATGAAACTCAAGTAGGACAACTAGGAGCTCAATTGTCTGGAGGACAAAAACAAAGGATTGCTATTGCAAGGGCTTTAATAAGAGATCCTAAAATCCTACTACTTGATGAAGCCACCAGTGCTTTGGATTCACAATCTGAAAGAGTAGTACAAGATGCACTTGACTTGGCTTCTAGAGGTAGAACAACAATCATCATCGCTCATCGCCTTTCTACGATTCGTAAGGCAGATTCAATAGTAGTTCTTCAATCAGGAAAAGTGGTGGAAAGTGGTTCTCACAATGAGCTACTCCAACTAAACAATGGACAAGGTGGGGTCTACACCAAAATGCTACATTTGCAACAAACAAGTCAAAATGAAAATGCACATCATGAAATAAACAAGAGCCCTCATGCAATGGAAAATCTAATAACAAGTTCAAATTCAAGCCGGAAAAGTACTCCAATTCATCATGCATTTAGCCCTGCACAACCATTTAGTCCCATATATTCAATCAGTGTTATCGGCTCTAGCTTTGATGATGACTACAGCAGTGAAAACTCGGAGAAACCTTACAAATCAAACATCTCTCACTGGCGTTTGCTACAAATGAATGCTCCTGAATGGAAGCATGCTTTGTTTGGATGTTTAGGTGCCATTGGCTCCGGAATATGCCAACCATTTTATTCCTATTGCTTAGGAATAGTTGCTTCTGTCTATTTCATAGATGATAATGCTCGGATCAAATCACAAATCAGGTTGTACTCAATCATCTTCTGCTGCATATCGGCTGTGAACTTCGTCTCAGGCCTCATTCAACATCACAATTTTTCCATCATGGGAGAGCGTTTGCTGAAAAGGGTGCGGGAGAATTTGCTCGAGAAAGTGTTAACCTTTGAGATAGGATGGTTTGATCAAGAGGAGAACACAAGTGCAGCAATCTGTGCACGTTTGGCGACTGAAGCTAACTTGGTTCGATCCCTCGTTGCAGAAAGAATGTCGTTGTTAGTTCAAGTCTCTGTTACTGCATTGCTGGCTTTTGTACTTGGTTTAATCGTTACATGGAGGGTAGCTATTGTCATGATCGCTATGCAGCCTTTGATCATTTCATGTCTCTATTCAAAAACCGTTCTCATGAAGAGTATGTCAGGAAAGGCAAAAAATGCTCAAAGAGATGCTAGTCAGTTAGCAATGGAAGCTACTACCAACCACAGGACTATTGCCGCATTCTCATCTGAGAAAAGGATACTAAATTTGTTCAAAACTGCTATGGATGGCCCTAAGATGGAAAGTATCAAGCAATCATGGATTTCAGGTTCCATATTGTCTATGTCACAGTTCATAACAACAGCATCTATAGCTTTGACTTTTTGGTATGGAGGCATATTATTAAATCGTAAACAAGTCGAATCAAAGCAACTCTTGCAAGTTTTCCTCATTTTGATGGGAACTGGTAGACAAATTGCTGATACAGGAAGCATGACTTCTGACATAGCGAAAAGTGGAAAAGCCATTAGTTCAGTATTTGCAATACTGGATAGGAAAACTCAGATTGAACCTGAAGATACTAGACACAGAAAGTTCAAAAAGAGTATGAAGGGTGTTATAAAACTGAAAGATGTGTTTTTCTCATATCCTGCAAGGCCAGACCAAATGATTCTCAAGGGTCTTAGTCTTGAGATTGAAGCTGGCAAAACAGTAGCCTTAGTAGGACAAAGTGGTTCAGGAAAATCCACCATAATTGGTTTAATTGAAAGATTTTATGACCCTATTAAGGGATCCATATTCATAGACAATTGTGACATCAAGGAACTTCATTTGAAAAGTTTGAGATCACATATTGCATTGGTGAGTCAAGAGCCCACCCTCTTTGCTGGAACCATACGCGACAACATTGTTTATGGGAAGGAAAATGCATCAGAGGCTGAAATAAGAAAAGCCGCACGTCTTGCAAATGCTCATGACTTTATAAGTGGAATGAGAGAAGGGTATGATACATACTGTGGAGAAAGAGGAGTGCAGCTATCAGGAGGACAGAAGCAAAGAATAGCAATAGCTAGAGCAATGTTGAAGAATCCATCAATACTTCTGTTAGATGAAGCAACAAGTGCTCTTGACAGTGTATCAGAGAATCTTGTACAAGAAGCATTGGAGAAAATGATGGTTGGAAGAACATGTGTAGTTATAGCTCACCGTTTGTCAACAATACAAAGTGTTGATTCCATAGCTGTGATTAAAAATGGAAAGGTGGTTGAACAAGGTTCTCATTCACAGTTACTGAATGAAAGATCAAATGGGACTTATTACTCTTTAATTAGGCTACAACAAAGTCATTCAACTTGA 3738 0.3965 MGNKGGFLRYADGVDKLLLFFGTLGCIGDGIQTPLTMLVLGSLIDDYARGGSEHNVSIHTINKYALKLLGIAIGVALSAFIVGVCWTRTAERQTSRMRIEYLKSILRQEVGFFDKQTNSSTTFQVIATITSDAQTIQDTMSDKVPNCLVHLSAFFSSFIVALFLSWRLAVAAFPFSIMMIMPALIFGNAMKELGGKMKDAFGVAGSIAEQAISSVRTVYSYVGEKQTLKRFSSALETCMKLGIKQGQTKGVVIGSFGLLYATWAFQSWVGSVLVRTKGEKGGKVFCAEICIIWGGLSLMSALPNLASILEATIAATRIFEMIERKPTINSTKEKGRILKHTRGEITFKDVEFSYPSRPDTLILQGLNLKVQACKTVGLVGGSGSGKSTIISLLERFYDPTRGAILLDGFDIKRLHLKWFRSLIGLVNQEPILFATSIRENVLFGKEGASMEDVITAAKAANAHDFIIKLPNGYETQVGQLGAQLSGGQKQRIAIARALIRDPKILLLDEATSALDSQSERVVQDALDLASRGRTTIIIAHRLSTIRKADSIVVLQSGKVVESGSHNELLQLNNGQGGVYTKMLHLQQTSQNENAHHEINKSPHAMENLITSSNSSRKSTPIHHAFSPAQPFSPIYSISVIGSSFDDDYSSENSEKPYKSNISHWRLLQMNAPEWKHALFGCLGAIGSGICQPFYSYCLGIVASVYFIDDNARIKSQIRLYSIIFCCISAVNFVSGLIQHHNFSIMGERLLKRVRENLLEKVLTFEIGWFDQEENTSAAICARLATEANLVRSLVAERMSLLVQVSVTALLAFVLGLIVTWRVAIVMIAMQPLIISCLYSKTVLMKSMSGKAKNAQRDASQLAMEATTNHRTIAAFSSEKRILNLFKTAMDGPKMESIKQSWISGSILSMSQFITTASIALTFWYGGILLNRKQVESKQLLQVFLILMGTGRQIADTGSMTSDIAKSGKAISSVFAILDRKTQIEPEDTRHRKFKKSMKGVIKLKDVFFSYPARPDQMILKGLSLEIEAGKTVALVGQSGSGKSTIIGLIERFYDPIKGSIFIDNCDIKELHLKSLRSHIALVSQEPTLFAGTIRDNIVYGKENASEAEIRKAARLANAHDFISGMREGYDTYCGERGVQLSGGQKQRIAIARAMLKNPSILLLDEATSALDSVSENLVQEALEKMMVGRTCVVIAHRLSTIQSVDSIAVIKNGKVVEQGSHSQLLNERSNGTYYSLIRLQQSHST 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06279 1245 SUPERFAMILY ABC transporter transmembrane region 7 326 IPR036640 GO:0005524|GO:0016020
Mepo3g06279 1245 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524|GO:0016887
Mepo3g06279 1245 CDD ABC_6TM_Pgp_ABCB1_D2_like 667 983 - -
Mepo3g06279 1245 SMART AAA_5 1028 1214 IPR003593 GO:0016887
Mepo3g06279 1245 SMART AAA_5 372 558 IPR003593 GO:0016887
Mepo3g06279 1245 FunFam ABC transporter B family member 4 335 594 - -
Mepo3g06279 1245 PANTHER ABC TRANSPORTER B FAMILY 8 688 IPR039421 -
Mepo3g06279 1245 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 678 965 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06279 1245 FunFam ABC transporter B family member 4 991 1244 - -
Mepo3g06279 1245 Pfam ABC transporter 1019 1168 IPR003439 GO:0005524
Mepo3g06279 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 586 IPR027417 -
Mepo3g06279 1245 Gene3D ABC transporter type 1, transmembrane domain 8 609 IPR036640 GO:0005524|GO:0016020
Mepo3g06279 1245 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 20 310 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06279 1245 Gene3D - 988 1244 IPR027417 -
Mepo3g06279 1245 Gene3D - 335 587 IPR027417 -
Mepo3g06279 1245 Pfam ABC transporter transmembrane region 20 276 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06279 1245 Pfam ABC transporter transmembrane region 679 946 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mepo3g06279 1245 CDD ABC_MTABC3_MDL1_MDL2 1001 1240 - -
Mepo3g06279 1245 CDD ABC_6TM_Pgp_ABCB1_D1_like 19 318 - -
Mepo3g06279 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 994 1240 IPR027417 -
Mepo3g06279 1245 Gene3D ABC transporter type 1, transmembrane domain 645 987 IPR036640 GO:0005524|GO:0016020
Mepo3g06279 1245 ProSitePatterns ABC transporters family signature. 484 498 IPR017871 GO:0005524|GO:0016887
Mepo3g06279 1245 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1001 1237 IPR003439 GO:0005524
Mepo3g06279 1245 CDD ABC_MTABC3_MDL1_MDL2 345 586 - -
Mepo3g06279 1245 Pfam ABC transporter 363 512 IPR003439 GO:0005524
Mepo3g06279 1245 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 345 581 IPR003439 GO:0005524
Mepo3g06279 1245 SUPERFAMILY ABC transporter transmembrane region 664 984 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06279 Mepo-Chr3 76919931 76925218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06279 680 1245 Calmodulin-binding Proteins AT2G36910 38.489 7.30e-115 387