Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06278 ATGGAAGAAACCTTAAACCCTACTGCTCCAGAGTTTAACCCAAACAACTACATTCCCATTCCAGTCGCCGTCGGTATTCCCTACCCCTATCCACCCTACGCCGTCACACCGCCGCCGCACCTTTCCACCATACCCACCCGCTCTATTCTCCTCAGTCCCGCCCCTCCCACCCCTGAAACCGACCTCCGAAAAGATCTTTCGGCTTTCGGTGAAGTCAGAGCCGTTCAAACGGACTCATTCCGTAACGGAGTCATAACTGCTCATTACTATGATCTTAGACACGCAGAGACGGCGTTTGCCGCTATTCGCACTCACCACGTCCTCTGTGCTGCGTATTTCAACCCTCTTTCTTATTCACAAATTTTCCCCACGCCGCCACCTCCGCCGCCGCCAGGTCTCGTCGCCGGTGTACCGCTGTGGGCCCACTATGTTCTCTCTGATGCTCAGAATCAAGGAACCCTAGTTGTGTTCAACTTAGACGACGACGTTTCCTCTGATCAGCTGCGACAAGTTTTCGAAGCTTTTGGAGCAATTAAGGAAGTGAGGGATACACCATGGAAGAAAAGGAATCAAAGTTTTGTGGAATTTTTTGACACAAGAGATGCAGAAAAAGCTTTGAAAGAATTGAATGGCAAAGAGATCAATGGAAAACCAATTGGTATTGAGTTTAGTAAACCAAAATTATTTCATTCTAACCCCAATGCTTATATCTCTAATAAGCCATTTAATTACAACCTTAATCCACCTTCTTCACCACGACGTCGTTTTGCTTCTCGTCCTCATTCACCACAATTATCATTATCTCACAAGAGTTTGACATTTAACCGGGTAAACCACAATAGGATTGGTTCAATGGGTTCATTGAAGGGGGAAGAGAGGTATCCTTTTGTTAGAGTTCAAAGTAGAGAGAGTTTTGGGGAAAGTGCTTGGAGTTGGAAGGGGAAGATAGCAAAGAAACATGAAAATCGTTTTCTAATCAAAGAAGATGCCATTGTTGAATCTGATCCTAGAACGACTCTCATGATAAAAAACATACCCAACAAATACAGTCAGAAGTTACTGTTGAATATGCTGGACAACCACTGTGTACACTGCAATGAGCAGCTAGGCGACGGCGAGCCTCTATCTTCCTATGACTTTGTCTATCTTCCTATAGATTTTAAGAACAAATGCAACGTGGGATATGGATTTGTGAATATGACATCTCCTGAGGCAACATTAAGATTCTACAAGGCCTTCCAGCACCAACACTGGGAGGTCTTTAACTCTAGAAAAATTTGCCAACTCACATACGCAAGAGTTCAGGGTTTGGAAGCGTTGAAAGAGCATTTTAAGAACTCAAAGTTCCCGTGTGAGATGGAGCATTACCTGCCAGTGGTGTTTTCACCACCTCGAGATGGGAAACAATTGACGGAGCCAATTCCAGTGGCAGGGAACATGCTACAAATTGGTGCTGCTCCTTCTGTAGCTGATGAGATGGAAGGTCAAGATCATAGGGTAGGTAGTGGTGGCTGTGACGTGATGAGCAGAAAAAGTGGCGGCGATGATGATGATAAAACAGATGTGAAGTGA 1572 0.4504 MEETLNPTAPEFNPNNYIPIPVAVGIPYPYPPYAVTPPPHLSTIPTRSILLSPAPPTPETDLRKDLSAFGEVRAVQTDSFRNGVITAHYYDLRHAETAFAAIRTHHVLCAAYFNPLSYSQIFPTPPPPPPPGLVAGVPLWAHYVLSDAQNQGTLVVFNLDDDVSSDQLRQVFEAFGAIKEVRDTPWKKRNQSFVEFFDTRDAEKALKELNGKEINGKPIGIEFSKPKLFHSNPNAYISNKPFNYNLNPPSSPRRRFASRPHSPQLSLSHKSLTFNRVNHNRIGSMGSLKGEERYPFVRVQSRESFGESAWSWKGKIAKKHENRFLIKEDAIVESDPRTTLMIKNIPNKYSQKLLLNMLDNHCVHCNEQLGDGEPLSSYDFVYLPIDFKNKCNVGYGFVNMTSPEATLRFYKAFQHQHWEVFNSRKICQLTYARVQGLEALKEHFKNSKFPCEMEHYLPVVFSPPRDGKQLTEPIPVAGNMLQIGAAPSVADEMEGQDHRVGSGGCDVMSRKSGGDDDDKTDVK 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06278 523 SMART rrm1_1 153 222 IPR000504 GO:0003723
Mepo3g06278 523 SMART rrm1_1 339 421 IPR000504 GO:0003723
Mepo3g06278 523 Gene3D - 145 238 IPR012677 -
Mepo3g06278 523 CDD RRM1_EAR1_like 46 120 - -
Mepo3g06278 523 Gene3D - 327 445 IPR012677 -
Mepo3g06278 523 PANTHER RNA RECOGNITION MOTIF-CONTAINING 328 458 - -
Mepo3g06278 523 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 154 219 IPR000504 GO:0003723
Mepo3g06278 523 FunFam Terminal EAR1-like 1 292 441 - -
Mepo3g06278 523 SUPERFAMILY RNA-binding domain, RBD 153 417 IPR035979 GO:0003676
Mepo3g06278 523 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 152 226 IPR000504 GO:0003723
Mepo3g06278 523 MobiDBLite consensus disorder prediction 490 523 - -
Mepo3g06278 523 CDD RRM3_EAR1_like 337 436 IPR034458 -
Mepo3g06278 523 Pfam RNA recognition motif 2 337 445 IPR007201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06278 Mepo-Chr3 76902571 76904966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06278 154 227 Eukaryotic Initiation Factors Gene Family AT2G23350 37.662 2.18e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06278 3 76902571 76904966 Mepo3g06278 3 76902571 76904966 ECH