Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06265 ATGGATCTGCCTGATAATTTCTTCCTACTAGCAACAACCCTCTTGGGCTTCATTTCTGTATGCAAAGTCTTTTTCCATTTTCTCAACTGGATATGGATCATGTTCTTGAGACCACACAAAAAACTCAAAGAATATGGTTCATGGGCTATAATCACCGGCTCCACCGACGGAATAGGCAAAGCCATGGCTATTGAGTTTGCATCAGAGGGACTCAACATTCTCTTGGTTGGTAGAAGCCCTCTTAAGCTTGAGGCAACATCAAAAGAGATTACAGATACAAGTTTTGGAAATGTTGAAGTCAAATGTGTTGTTGTAGACTTGCAAAAAATTAGTGGAGAGGAAATAATGAAAAGAGTAGAAGAAGCTATAGATGGTTTAGATGTTGGAATTTTAGTTAATGGTGCTGGTGTGGCTTACCCTTATGCAAGATTTTTTCATGAGGTTGATTTGGATTTGATGGATTCTATTATTAAAGTGAATGTTGAAGGAACAACTTGGATCACAAAAGCTGTGCTTCCTAGTATGATTAAGAAGAAAAAAGGAGCTATTATTAACATTGGTTCTGGCTCCACTGTTGTGATTCCTTCATATCCTCCTGTCACACTTTATGCAGCTTCAAAAGCATATCTTGCAATGTTCTCTGCATGCACCAATTTGGAATACAAGCAGCTAGGAATTGACATCCAGTGTCAGGTACCATTGTTTGTGTCAACAAAAATGACAAGGATGAGGGCATCACTTTTTGTTCCAACACCAGATAAATACAGCAAAGCATGCACAAAATGGATTGGCTATGAAAAATTGGTTGTACCTTACCTCTTTCACAATCTGCAGTCATTTCTCATAAGGAAAATTCCTGATGTATTCTTGGATTCCTACATGTTGCGTAATTTGCTTTACTCACGTAAAAGAGGGCTCATCAAGGACTCCCAGATCAAAGGATCAGAAGCATCTAGTAATTCTGAAACAAATAAACATTGA 981 0.3812 MDLPDNFFLLATTLLGFISVCKVFFHFLNWIWIMFLRPHKKLKEYGSWAIITGSTDGIGKAMAIEFASEGLNILLVGRSPLKLEATSKEITDTSFGNVEVKCVVVDLQKISGEEIMKRVEEAIDGLDVGILVNGAGVAYPYARFFHEVDLDLMDSIIKVNVEGTTWITKAVLPSMIKKKKGAIINIGSGSTVVIPSYPPVTLYAASKAYLAMFSACTNLEYKQLGIDIQCQVPLFVSTKMTRMRASLFVPTPDKYSKACTKWIGYEKLVVPYLFHNLQSFLIRKIPDVFLDSYMLRNLLYSRKRGLIKDSQIKGSEASSNSETNKH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06265 326 Gene3D - 42 273 - -
Mepo3g06265 326 PRINTS Glucose/ribitol dehydrogenase family signature 126 137 IPR002347 -
Mepo3g06265 326 PRINTS Glucose/ribitol dehydrogenase family signature 224 241 IPR002347 -
Mepo3g06265 326 PRINTS Glucose/ribitol dehydrogenase family signature 48 65 IPR002347 -
Mepo3g06265 326 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
Mepo3g06265 326 PRINTS Glucose/ribitol dehydrogenase family signature 203 222 IPR002347 -
Mepo3g06265 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 46 305 IPR036291 -
Mepo3g06265 326 PANTHER RH59310P 9 311 - -
Mepo3g06265 326 Pfam short chain dehydrogenase 48 242 IPR002347 -
Mepo3g06265 326 PIRSF 11-beta-HSD1 2 308 - -
Mepo3g06265 326 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 137 IPR002347 -
Mepo3g06265 326 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 IPR002347 -
Mepo3g06265 326 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 203 222 IPR002347 -
Mepo3g06265 326 CDD 17beta-HSD1_like_SDR_c 46 286 - -
Mepo3g06265 326 FunFam Hydroxysteroid (17-beta) dehydrogenase 3 42 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06265 Mepo-Chr3 76774672 76777579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06265 8 313 Lipid Metabolism Gene Families AT1G67730 49.838 5.56e-107 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06265 K10251 - gmx:100816067 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06265 3 76774672 76777579 Mepo3g06265 3 76774672 76777579 ECH
Mepo2g04119 2 50106351 50109852 Mepo3g06265 3 76774672 76777579 PCT