Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06258 ATGGCTTTATTTTTTCTCTTTCTCCTAACACTTCTTGTGTTAATATCATGTGCATCTTGCCAACTTCAAGAATTTATAAGCATTGATTGTGGAGGAACAAGAAGTAACTACACTGACACAACCACAGGGCTAACATGGATTTCAGATTCTGAGATTATGAAACATGGAGAGACAGTGGAAGTACAAAGCCCTAATGGAACCGAAGTTCAGTATCAGAAACGCAGAGATTTTCCAACAGATAGCAGAAAATATTGTTATACACTTGAGACTGAAGAGAGAAGAAGGTATTTGGTAAGAGCAACTTTTCAGTATGGAAGTTTGCAAAATGGAGACACATACCCTCAGTTTCAACTTTACTTGGATGCAACTAAATGGGCTACTGTGTCAATTTATGATGAGTCAAGAATATATGTTAAGGAAATGATCTTTAGGGCACCTTCAAATTCTGTTGATGTTTGCATGTGTTGTGCTACAACTGGTTCTCCGTTCGTATCTACTATTGAACTTAGGCCCTTGAATCTTTCTATGTATGCCACTGATTATGAGGATGATTTCTTCTTGAAAGTAGCTGCAAGAATTAACTTTGGTGCTCCAACTGGCGATGCTGTCAGGTATCCAGAGGATCCATATGATAGAATATGGGAGTCTGATCTTGGAAAAAGACAAAATTTTCTTGTTGGGGTGGCCGCAGGAACCGAAAGAATAAATACAACAAGGAACATAGCGATAGAGACAAGAGAATATCCACCTGTTAAGGTGATGCAAACTGCGGTTGTTGGCACAAAAGGGCTACTTAGCTATAGACTGAACCTTGAAGACTTTCCTGGGAACGCAAGAGCGTATGCATATTTAGCAGAGATTGAAGATCTCAGTCAGAATGAGACTAGAAAATTCAAATTGGAGCAACCTTTTATAGCTGATTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCTAATGGGAGCTACACACTTTATGAACCAAGTTACATGAATGTGAGTTTGGAATTTGTTCTTTCCTTCTCATTTAAGAGGACGCCGGATTCTACTAGAGGACCTCTACTAAATGCAATGGAAATAAGCAAATATCAAGAAATTGCTTCAAAGACATTCAAGCAAGATTCAAATTTTGTAAATGCATTTTCCTCCTTGTCTGATGAAATTATCCCAAAGAATGAAGGCGATCCTTGCGTTCCAACTCCATGGGAGTGGGTGAATTGTAGTACCGCTACACCTGCAAGAATTACAAAGATAAACTTGTCAGGAAGGAATTTGACCGGTGAAATCCCACGAGAGCTCAACAACATGGAAGCCTTGACAGAATTGTGGTTAGATAGAAACTTACTTACAGGTCAACTACCAGACATGAGCAATCTTATCAATCTAAAGATTGTGCATCTAGAGAACAACAAATTGACCGGTCCACTACCAACATACCTGGGTAGTTTACCAGGTTTACAAGCATTGTACATACAGAATAACTCATTTACCGGGGACATACCAGCAGGATTATTATCTATGAAAATCACTTTCATCTATGATGATAATCCGGGATTACATAAAAGGAACAAAAAGCATTTTCCGTTGATATTAGGAATTTCTATCGGAGTACTAGTGATTCTATTAGTTTTGTTCTTAGCGAGTTTAGTGTTATTGCGTTATCTTAGGAGAAAGGCTTCTCAACAGAAAAGTGACGAAAAAGGTATTTCAGGACGCAGTAGTACCAAACATTTAACTGGATACTCTTTTGGTCGGGATGGGAATTTAATGGACGAAGGTACTGCGTACTATATAACTCTCTCAGACTTGAAAGTAGCTACAAACAATTTTTCAAAGAAAATTGGAAAGGGAAGCTTTGGATCTGTCTATTATGGGAAAATGAAAGATGGAAAAGAGATAGCAGTTAAGACTATGACTGAACCATCCAGCCATGGGAACCATCAATTTGTAACTGAGGTAGCCCTCCTATCAAGAATTCATCACAGAAACTTGGTTCCTCTGATTGGATATTGTGAAGAAGAATATCAGCATATTCTTGTTTATGAGTATATGCACAATGGCACTCTAAGGGATCACATTCATGAAAGTTCGAGTGAGAAGCAATTAGATTGGTTGACTCGTCTTCGAATTGCAGAAGATGCTGCCAAAGGTCTTGAATATTTACACACAGGATGCAATCCCAGTATCATTCACCGAGACGTAAAGACGAGCAACATTCTCCTAGACATCAATATGAGAGCCAAAGTGTCAGATTTTGGACTCTCGAGACTAGCCGAAGAAGATTTAACTCATATATCAAGTGTTGCAAAGGGAACTGTGGGCTACCTGGATCCTGAGTACTATGCAAATCAACAATTGACTGAAAAGAGTGATGTATACAGTTTTGGAGTTGTTCTATTGGAACTGATATGTGGGAAGAAGCCTGTATCACCAGAAGATTATGGACCAGAAATGAATATAGTTCACTGGGCAAGATCCTTAATTCGTAAAGGGGATATAATCAGCATTATGGATCCCTTACTAATTGGAAATGTGAAAACTGAATCAATTTGGAGGGTTGCTGAAATAGCCATGCAATGCGTAGAACCACATGGTGCCTCAAGGCCAAGAATGCAAGAAGTGATTTTGGCTATACAAGATGCTTCTAAGATTGAAAAAGGAACAGAAAGTCAACTAAAAGTCTCATCCTCAAGTAGTTCAAAACCACAATCTTCAAGGAAAACTTTACTTACAAGCTTTCTTGAAATTGAAAGCCCTGATTTGTCAAATGGTTGTCTTCCATCAGCAAGATAA 2793 0.3856 MALFFLFLLTLLVLISCASCQLQEFISIDCGGTRSNYTDTTTGLTWISDSEIMKHGETVEVQSPNGTEVQYQKRRDFPTDSRKYCYTLETEERRRYLVRATFQYGSLQNGDTYPQFQLYLDATKWATVSIYDESRIYVKEMIFRAPSNSVDVCMCCATTGSPFVSTIELRPLNLSMYATDYEDDFFLKVAARINFGAPTGDAVRYPEDPYDRIWESDLGKRQNFLVGVAAGTERINTTRNIAIETREYPPVKVMQTAVVGTKGLLSYRLNLEDFPGNARAYAYLAEIEDLSQNETRKFKLEQPFIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFKRTPDSTRGPLLNAMEISKYQEIASKTFKQDSNFVNAFSSLSDEIIPKNEGDPCVPTPWEWVNCSTATPARITKINLSGRNLTGEIPRELNNMEALTELWLDRNLLTGQLPDMSNLINLKIVHLENNKLTGPLPTYLGSLPGLQALYIQNNSFTGDIPAGLLSMKITFIYDDNPGLHKRNKKHFPLILGISIGVLVILLVLFLASLVLLRYLRRKASQQKSDEKGISGRSSTKHLTGYSFGRDGNLMDEGTAYYITLSDLKVATNNFSKKIGKGSFGSVYYGKMKDGKEIAVKTMTEPSSHGNHQFVTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHESSSEKQLDWLTRLRIAEDAAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVAKGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELICGKKPVSPEDYGPEMNIVHWARSLIRKGDIISIMDPLLIGNVKTESIWRVAEIAMQCVEPHGASRPRMQEVILAIQDASKIEKGTESQLKVSSSSSSKPQSSRKTLLTSFLEIESPDLSNGCLPSAR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06258 930 SUPERFAMILY Protein kinase-like (PK-like) 593 875 IPR011009 -
Mepo3g06258 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 729 741 IPR008271 GO:0004672|GO:0006468
Mepo3g06258 930 SMART serkin_6 608 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06258 930 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 408 508 - -
Mepo3g06258 930 Gene3D Transferase(Phosphotransferase) domain 1 684 902 - -
Mepo3g06258 930 PANTHER OS07G0107800 PROTEIN-RELATED 26 881 - -
Mepo3g06258 930 ProSiteProfiles Protein kinase domain profile. 608 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g06258 930 ProSitePatterns Protein kinases ATP-binding region signature. 614 636 IPR017441 GO:0005524
Mepo3g06258 930 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 684 891 - -
Mepo3g06258 930 SUPERFAMILY L domain-like 395 508 - -
Mepo3g06258 930 Pfam Protein tyrosine and serine/threonine kinase 610 875 IPR001245 GO:0004672|GO:0006468
Mepo3g06258 930 FunFam serine/threonine-protein kinase PBS1-like 585 683 - -
Mepo3g06258 930 Gene3D Ribonuclease Inhibitor 368 513 IPR032675 -
Mepo3g06258 930 CDD STKc_IRAK 614 875 - -
Mepo3g06258 930 Gene3D Phosphorylase Kinase; domain 1 585 683 - -
Mepo3g06258 930 Pfam Malectin-like domain 28 362 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06258 Mepo-Chr3 76715519 76720997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06258 9 930 Receptor kinase-like Gene Family AT1G67720 69.189 0.0 1268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mepo3g06258 Malectin_like 6.8e-87 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06258 - - gmx:100807148 1563.13