Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06250 ATGTATTTATCATCAGAAAAGCCTCGCCCAATCGATTTCTACAAAGAAGAAGCACGCGACATGATGATGGAAGTAGTAACCAACACCGATCTTCAACCACCACCGCCACCGCCGCAACATCACCATCACCTTCAACAACAACAACCGCAAATGATTCTCACCGCCGAGAGCAGCGGCGACGATCCTGAGATGGAGATCAAAGCTCCAAAGAAACGCGCGGAAACCTGGGTTCAAGACGAAACTCGAAGCCTCATTGGTCTACGACGCGAGATGGATTCGCTATTCAACACTTCGAAGTCGAATAAGCATCTTTGGGAGCAGATTTCAGCGAAGATGAGAGAAAAGGGTTTTGATCGGTCACCGACTATGTGTACTGATAAATGGAGGAATCTTTTGAAAGAGTTTAAGAAAGCGAAGCATCATGATCGAGGTGGTGGAAGTGGTTCTGGTGGGAAAATGAGTTGTTACAAAGAGATTGATGAGATCTTAAGAGAGAGAAGTAAGTGTGGACAATATAAGAGTGTTGTTACACCTACTTCTAAAGTTGAATCTTCTTACATGCAATTTGATAAAGGTATTGATGATGCCAACATTTCTTTTGGACCCGTTGAAGCTTCTGGAAGACCAACACTCAATCTTGAGAGAAGTTTGGATCATGATGGGCATCCTCTTGCCATTGCCGCAGCAGATGTTGCAGCAAGCGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCCGGAAATGGTGGGGAAAGTCAGTCTTGCTGTGGAAGGGTTATATCAGTCAAATGGGGTGATTATACAAGACGGATAGGTATTGATGGCACTCCGGAAGCCATAAAGGAGGCAATTAGGGCCGCTTTTAGGTTGAGAACTAAACGTGCATTTTGGTTGGAGGATGAGGAACAGATTATCAGAAGCATTGACCGTGACATGCCTATTGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATCAAAGTATGCCTATATGACGAGTCTGACCATATCCCTGTGCATACTGAAGAGAAGATATTTTATACCGAGGATGATTACCGTGATTTTCTGGCACGTCGGGCTTGGACAGGTCTAAGAGAATTTGATGGTTATAGGAATATTGACAATATGGATGATCTTCGGCCTGGTGCCATATACCGAGGCGTGAGTTGA 1170 0.447 MYLSSEKPRPIDFYKEEARDMMMEVVTNTDLQPPPPPPQHHHHLQQQQPQMILTAESSGDDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHHDRGGGSGSGGKMSCYKEIDEILRERSKCGQYKSVVTPTSKVESSYMQFDKGIDDANISFGPVEASGRPTLNLERSLDHDGHPLAIAAADVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEEQIIRSIDRDMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEEKIFYTEDDYRDFLARRAWTGLREFDGYRNIDNMDDLRPGAIYRGVS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06250 389 Pfam Myb/SANT-like DNA-binding domain 75 162 IPR044822 -
Mepo3g06250 389 CDD GT1 74 139 - -
Mepo3g06250 389 Gene3D - 76 138 - -
Mepo3g06250 389 PANTHER FI21293P1 33 387 - -
Mepo3g06250 389 FunFam trihelix transcription factor GT-1 76 138 - -
Mepo3g06250 389 MobiDBLite consensus disorder prediction 28 49 - -
Mepo3g06250 389 ProSiteProfiles Myb-like domain profile. 68 132 IPR001005 -
Mepo3g06250 389 SMART sant 72 134 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06250 Mepo-Chr3 76634964 76640303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06250 21 388 Trihelix Transcription Factor Family AT3G25990 66.935 8.32e-180 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo3g06250 Myb_DNA-bind_4 4.3e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06250 - - tpra:123907830 696.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06250 3 76634964 76640303 Mepo3g06250 3 76634964 76640303 ECH