Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06238 ATGATAAGATGGTTTCAGATGACCGACAGAGTGGCTGACATTGTTGTTGTCAGTCCTTCTACTTGGTCTATGCCTCTATGGTTCTTGTTCATGACTGTGTCTCGTACTGGACCAGGAGCTGTTAGCATGGCAAATGCTGGTCCCAACACTAATGGGAGTCAGTTTTTCATATGCACTGTCAAGACACCGTGGCTGGATCAGAGACATGTTGTATCTGGCCAAGTTTTGGAAGGCAAGGACATTGTTAGGTTGATTGAACCACAGGACACAGATCATGGTGATCCTCCCTGA 291 0.4639 MIRWFQMTDRVADIVVVSPSTWSMPLWFLFMTVSRTGPGAVSMANAGPNTNGSQFFICTVKTPWLDQRHVVSGQVLEGKDIVRLIEPQDTDHGDPP 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06238 96 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 35 92 IPR002130 GO:0000413|GO:0003755
Mepo3g06238 96 Gene3D - 18 96 IPR029000 -
Mepo3g06238 96 SUPERFAMILY Cyclophilin-like 33 95 IPR029000 -
Mepo3g06238 96 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 30 96 IPR002130 GO:0000413|GO:0003755
Mepo3g06238 96 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Mepo3g06238 96 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 39 54 IPR002130 GO:0000413|GO:0003755
Mepo3g06238 96 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 82 IPR002130 GO:0000413|GO:0003755
Mepo3g06238 96 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 32 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06238 Mepo-Chr3 76536654 76538334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06238 36 96 U-box Gene Family AT5G67530 42.623 7.04e-10 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06238 K03768 - gmx:100777088 117.087