Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06230 ATGATGGCGTTGGTGAGTCCTAGTATAGGGCTAAGGAAACAGGTTTTTCCAATTGACTACGAAACAGAGATGTCACAGCGTCTTGTTGATGCAGCTCATCGCGGTGACACGGATTCTGCCATTGAATGTTTAGCGAATCCATTAGTCGATGTTAACTTCATCGGAACGGTGATGTTGAAGTCCAAAACAATGGAGATCGTGCTTCAAGATGAGTCACCTCATCGAGTAAATTCAGTGTATGAAGAGTTCAAAATTGAGGTCACTGCTCTGTTTTTGGCTGCACATTCTGGAAATTTGACGTTAATTCGTAAACTACTGAATGTGGGAGCTAATGTAAATGTGAGATTGTTCCGGGGCTATGCTATAACAGCAGCAGTGAGGGAAGGCCATTTGAAAATATTGGAGGTCCTTATCAATGGTGGAGCGTCACAACTTGCATGTGAAGAGGCTTTACTTGAAGCAAGTTATGTGGGACAGGCAAGATTTGCTGAACTACTGATGCAATCCAACATGATTCGTCCTCATGTTGCAATACATGCCCTTGTCTCTGCTTGTTGCAGAGGATTCACTGAGGTTGTTGATGTACTCATCAAGCATGGAGTGGATGTTAATGCAATGGATAGGACTCTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAATGCATTATTTGCTGCTGTGGTCAGCAGGCAGATAAATGTAGTTAGACTACTGTTGCAGGTTGGTACAAGACTAGATATAAAGGTCAAATTAGGAGCTTGGTCTTGGGAAACAGATACAGGAGAAGAATTTCGTGTAGGTGTTGGACTAGCCGAGCCTTATCCAATCACATGGTGTGCTGTTGAGTATTTTGAATCAACTGGTACTATACTCAATATGCTTCTCTATCACCTCTCACCTAATAGTTTCCACATTGGAAGAACTCTCTTGCACCACACCATCATGTGCAACAATGAAAGAGCATTGAATATACTTTTAAGTAATGGTGTGGATACAGAACTAGTAGTGCAAACTACTGAAGAAACCAATGTACACCCTATTCACATGGCTGCGCGGCTTGGATCATGCAACATTCTTCGGTGTTTGATTAATGGTAAGTGTAACTTGGACTCACAAACAAAGTTTGGTGACACGGCATTGATGATTTGTACAAGGAATAAAAATGAGAAGTGTCTTAGAGTTTTAGTATCATCAGGAGCTGACTTGGGGATAGTAAATTTGTCCGGTCATTGCGTAACTTCAATAGCAAGTTTTAATCAGTGGACTCAAGTTTATCAGAAAGCAATTTTGGATATAATTAGATCCGGAAAAGGTGTTAAATCAAGCAATGCATCTAGATTTTCCGCTTTGTTATTTGTCACTCGCGCGAATGACATTGAGGCTTTGAAAAAACTCATTGAATACCGGAATATAAATCTAGATGAACAAAATGGAAATGGACTTTCAGCTGTAATGATAGCTGCCGCAGAGGGTAACGTGGAAGCTTTCAAGGTACTTCTTCATGCTGGAGCTGATGTAATCAATCTTAAAAACAAATATGGTTTGACAGCTCTTAATCTCATAGACTTGAACCAAAATGGTGAAAATAAGGAAAATTTTCATAAGGTGATGTTTGAATATGCACTTAAAAAGGGATGTCTGAATATTAGTACTTTAACCGAGGCGAATCCTCTTCACCGTGCAGCTTGTTATGGAGACATAAGCATTGTCGAAAAGTTATTAAAAGAAGGGTACTATGATGTTAATGGTTTTGACGGAAATGGATATACACCATTGATGTTAGCAGCAAGAGAAAGTAATGGAGAAATGTGTGAGATTTTGATATCTTATGGAGCAAAATGTGATGTTAAAAATGAGAGGAATGAAACAGCACTTTTACTTGCTAGAGAAAATAACAAAGGAAATGATGCAGAGCGTGTGATACTAGATGAGTTAGCTAGAAGAGTAGTGTTGTGTGGTGCATGTGTGAAGAAACATACAAAATGTGGTAAAGGGTTGCCACATAAGAAACAATTGGTAATGATTGGTGCTGCTGGAATTTTACGTTGGGGGAAATCAAATAAGAGAAATGTTGTTTGTAAAGAGGCTGAGGTTGGACCAAGTGAAAGATTTCGATGGAACCGTAGGAAGAAGTTTGATGTTGATGAGTTGGGTATGTTTTATGTTGTTACTGCAAAAAATAAGGAGGTGCATTTTGTTTGTGAAGGTGGGGTTGAAATGGCTGAGTTATGGGTAAGAGGGATTAGATTAGTAACAAGAGAAGCCATTTTTGGTTCTAGAGCTAATACTGGCTAA 2307 0.3932 MMALVSPSIGLRKQVFPIDYETEMSQRLVDAAHRGDTDSAIECLANPLVDVNFIGTVMLKSKTMEIVLQDESPHRVNSVYEEFKIEVTALFLAAHSGNLTLIRKLLNVGANVNVRLFRGYAITAAVREGHLKILEVLINGGASQLACEEALLEASYVGQARFAELLMQSNMIRPHVAIHALVSACCRGFTEVVDVLIKHGVDVNAMDRTLLQSSKPFLHANVDCNALFAAVVSRQINVVRLLLQVGTRLDIKVKLGAWSWETDTGEEFRVGVGLAEPYPITWCAVEYFESTGTILNMLLYHLSPNSFHIGRTLLHHTIMCNNERALNILLSNGVDTELVVQTTEETNVHPIHMAARLGSCNILRCLINGKCNLDSQTKFGDTALMICTRNKNEKCLRVLVSSGADLGIVNLSGHCVTSIASFNQWTQVYQKAILDIIRSGKGVKSSNASRFSALLFVTRANDIEALKKLIEYRNINLDEQNGNGLSAVMIAAAEGNVEAFKVLLHAGADVINLKNKYGLTALNLIDLNQNGENKENFHKVMFEYALKKGCLNISTLTEANPLHRAACYGDISIVEKLLKEGYYDVNGFDGNGYTPLMLAARESNGEMCEILISYGAKCDVKNERNETALLLARENNKGNDAERVILDELARRVVLCGACVKKHTKCGKGLPHKKQLVMIGAAGILRWGKSNKRNVVCKEAEVGPSERFRWNRRKKFDVDELGMFYVVTAKNKEVHFVCEGGVEMAELWVRGIRLVTREAIFGSRANTG 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat region circular profile. 591 623 - -
Mepo3g06230 768 Gene3D - 297 432 IPR036770 -
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat profile. 379 411 IPR002110 GO:0005515
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat region circular profile. 557 581 - -
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat profile. 591 623 IPR002110 GO:0005515
Mepo3g06230 768 Gene3D - 17 150 IPR036770 -
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat profile. 180 208 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 176 205 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 309 338 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 379 408 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 117 146 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 483 513 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 346 375 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 591 620 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 85 114 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 557 587 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 449 477 IPR002110 GO:0005515
Mepo3g06230 768 SMART ANK_2a 222 251 IPR002110 GO:0005515
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Mepo3g06230 768 SUPERFAMILY Ankyrin repeat 83 256 IPR036770 -
Mepo3g06230 768 SUPERFAMILY Ankyrin repeat 310 643 IPR036770 -
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat profile. 557 581 IPR002110 GO:0005515
Mepo3g06230 768 Pfam Ankyrin repeats (3 copies) 541 622 IPR002110 GO:0005515
Mepo3g06230 768 Pfam Ankyrin repeats (3 copies) 315 408 IPR002110 GO:0005515
Mepo3g06230 768 Gene3D - 433 533 IPR036770 -
Mepo3g06230 768 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Mepo3g06230 768 Gene3D - 151 259 IPR036770 -
Mepo3g06230 768 Pfam Ankyrin repeats (many copies) 460 504 IPR002110 GO:0005515
Mepo3g06230 768 Gene3D - 534 675 IPR036770 -
Mepo3g06230 768 PANTHER ANKYRIN REPEAT-CONTAINING 21 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06230 Mepo-Chr3 76479327 76484011 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06230 353 538 Ion Channels AT2G25600 29.032 2.88e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06230 - - mtr:11444172 1494.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06230 3 76479327 76484011 Mepo3g06230 3 76479327 76484011 ECH