Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06219 ATGGTTATGGCAGAAGAAGAGAAAACGTTGTCATTTGAACCAGAGTTTCCGAAGAGTAGAGTGAAGAAGATAATCACTCTGGACAAAGACGTGAAGAGGGTGAGTTCAGAAGCGTTGTTCTTGGTGTCACGATCTACGGAGCTTTTTTTACAGTTACTTGCTGAAAAGTCTGCGGAAGTTGCTATTGAGAAGAAGCGAAAGACGGTGAAGCTTGAACATATTAGAATCGCCGTGAAGAGAAACCGTCCAATAAGTGATTTTCTATTCGATTCGCTTCCGGTGCCTTTGGAAGCTGCGAAATCCGATAAACCAGCGGCGGCGGTTGTTGATCGGCCTAAATCTGTCCCGGTTGGTACCCGCTGCATCGATCAGATCTTCCGAAAGTCTGAAGCCGAAGTTGATGCTCAAGCGCAAGCGCCTGAACCTGAGCCGGAGCCTGAACCTGAACCTGAACCAGAACTCATGGAGGAGGCATAG 477 0.478 MVMAEEEKTLSFEPEFPKSRVKKIITLDKDVKRVSSEALFLVSRSTELFLQLLAEKSAEVAIEKKRKTVKLEHIRIAVKRNRPISDFLFDSLPVPLEAAKSDKPAAAVVDRPKSVPVGTRCIDQIFRKSEAEVDAQAQAPEPEPEPEPEPEPELMEEA 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06219 158 MobiDBLite consensus disorder prediction 144 158 - -
Mepo3g06219 158 MobiDBLite consensus disorder prediction 131 158 - -
Mepo3g06219 158 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 6 127 - -
Mepo3g06219 158 Gene3D Histone, subunit A 1 93 IPR009072 GO:0046982
Mepo3g06219 158 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 15 78 IPR003958 -
Mepo3g06219 158 SUPERFAMILY Histone-fold 14 81 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06219 3 135 CCAAT-HAP5 Transcription Factor Family AT5G43250 55.224 7.26e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo3g06219 CBFD_NFYB_HMF 1.7e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06219 - - gmx:100790556 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06219 3 76379105 76380034 Mepo3g06219 3 76379105 76380034 ECH