Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06213 ATGTCTCAACTGCACTTAAGTGTAGTTCAAGTCTTTTCTGAACGAAGTGAGTTTCTGAAGGTGTTGAGAGGCATGGAGCCTAAAGGGGTGATATTAAGTGAGAACAACATGAAGTGTTGCTGCAGTGGTTGTGGTGATTTCGCTACTGGATTCTCTCGAAGAGTGGAGGACTTATGGAAGTTTTTAGATTCAATTAGTTCGACATTCAAAAACCGTGACAGTGATGAAAGGAGAATGATGGAAGGTGCATCTGCGTCTGCAAAAGCATTGGCAAACCAACGTGAAATGAATGAAAGGAAAGGAGAGAAAAATGGTGTGAAAGAATGA 327 0.4128 MSQLHLSVVQVFSERSEFLKVLRGMEPKGVILSENNMKCCCSGCGDFATGFSRRVEDLWKFLDSISSTFKNRDSDERRMMEGASASAKALANQREMNERKGEKNGVKE 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06213 108 MobiDBLite consensus disorder prediction 73 108 - -
Mepo3g06213 108 MobiDBLite consensus disorder prediction 93 108 - -
Mepo3g06213 108 Pfam GRAS domain family 9 86 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06213 Mepo-Chr3 76316433 76316759 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06213 3 100 GRAS Transcription Factor Family AT3G13840 48.980 1.67e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo3g06213 GRAS 4.3e-08 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06213 - - mtr:11434050 151.754