Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g06201 ATGCTACCTGGTTTGCAATACAATATCAATGATCTGTTTCAAGAAGCTAAGAAAAGATGGCTCAAGCCTATAGAAGTGCTTTACATTTTGCAGAATCATGATACCTGCAAGTTCACCGATTTTCCTCTTAACCAGCCTCGTGGTGGATCTTTGTATCTGTTTAATAGAAGAGTCATGCGTTTCTTTCGAAAAGATGGTCATAATTGGCGGAAGAAAAAAGATGGACGAACTGTTTCAGAAGCGCATGAACGGCTTAAGGTTGGAAATGTTGAAGCTCTAAACTGCTACTATGCACATGGACAGGAGAACCGTAGTTTCCAGAGGCGAAGTTATTGGATGTTGAACTCGGAATATGAGCATGTTGTTCTCGTGCATTACAGAGAAACAAATGAGGGGACATCCAATTCTGGTTGTGTCACACAATCATCACCGTTTAGTCAGAGTCGTAGCTCATATACTACTCCAAACCCTGAGACAACATCCATAGTTGGTGATTCATGTGAACCTAATCAGAATTTCTCCAGTCCTGGGTTCTTAGAAGTCACCTCTGATATTGCCATCATGAATAATGGAATGGATCACTTAGAGAAAACAAACGTGCAAGCTCTGCGCCAATTGGAGGAACAATTAAGTTTGAATGAGGACAGCTTCACAGAAATTCCTCCCTTTTATAGTGAGCATGAAATTCCTGTTGCATTCGCTGGACTAGATGATCATAAACAACCATATGATGGAACAAAAGATTGCAGTGGTAATCATTATCATGAATTACTTGACCATGATTGCCCTGGTGGGCATGAAAAAACCTTATCTTGGACAGAGATGCTGGGATCATCCAAGTCCTCATTTGTGAACAAGTTACCAGAACAACATGCATACAAGGCATTTGAAAATGAAAATCCTCTATCTTCTCTTGGAAGAGACATGATTGCCAACCAGGAAACCAGTTACCGGATACACCCCAACAGAAATAATGATGAGAACTCATACTTTTTACTTCCTCAAGACACTGGTGGAGTCCAATTTTCTCCATATTCTTCGATAGAAACTCAAGGAACTAATTCTGACTACTATGAAACATTGTTTGACCAAAGCCAAATTCAAGAGCCTCGGGATGCATATTCAAGCTTGACTGTTGGCCAGAAACAGAAATTTACAATTACGGCTGTCTCCCCAGAATATTGTTATGCCAATGAGGCAACAAAGGTGATCATTGTTGGATCCTTTCTCTGCCTCCCCTCGGATTCTACCTGGGCTTGTATGTTTGGTGACGTTGAAGTTCCTGCTGAAATAATTCAGGATGGTGTAATCTCTTGTGAGGCTCCGTCCCATCTTCTTGGAAAGGTTGCTCTGTGCATTACTTCAGGAAATAAGGAGCCGTGCAGTGAAATCAAAGAGTTTGAGTTTCGTAATAAGACCAATAGTTGCATTCATTGTAATGTTTTGGAAACAGAAGTTGCCCATAGTCCAGAAGAGCTGTTATTACTTGTTCGATTTGCAGAAATGCTCCTCTCTGCTTCGACTATAAAGGATGATAGCTCAGAATCTGGGAGTCAATTTTCAACTGAACAGAAAGCAGATGATGATTCATGGAGCCATATTATAGACGCTCTCCTAGTTGGCAACGTGACTTCATCCGGTACTATTGATTGGCTTCTTCAAGAGCTGCTGAAGGATAAGCTGCAGCACTGGCTTTCTTGCAGATCCAATGAACGAGATGAAGATGCAGGTTGTTCTTTGTCCAAGAAAGAGCAAGGGATTATACACATAATTTCTGGATTGGGTTTCGAGTGGGCCCTGAACCCCATTCTCAGCTGTGGAATGAATGTTAATTTCCGTGATATCAATGGATGGACTGCCCTTCATTGGGCTGCACGGTTTGGAAGGGAAAAAATGGTTGCTTCACTTATAGCTGCTGGTGCATCTGCTGGAGCAGTGACGGATCCAAGTTCACAAGATCCAAATGGTAAAACTGCTGCATCTATTGCGGCCATCAATAGCCACAAGGGACTGGCAGGTTATCTTGCAGAAGTAGATCTAACAAGTCATCTGTCATCCCTCACATTGGAAAAGTGTGAAGTTCCTAAAGATTCTTCTGAGCTTGAAGCTGAGTTAACTGTCAGTAGTGTGTCTAAGAAAAATCTTGAAGCCAGTGATGATGAGGATTCACTAAAAAATACCTTGGGTGCTGTCAGAAATGCAGCTCAGGCAGCTGCACGTATACAGGCTGCTTTCCGTGCACATTCTTTTAGAAAACGGATGGAGAGAGAAGCTGCCTCCACCACTTGTCTAAATGGATATGTCACTGGTATAGGTAGCATTGGTGGATATGTTAGGAGCTCACGTGATTACAATTCAGCTGCCTTATCAATTCAGAAGAAATATAGAGGCTGGAAAGTTCGCAAAGAGTACTTAGCTTTTCGCCAAAAAGTTGTAACGATACAGGCTCATGTGAGGGGTTACCAGACTCGGAAGCAATACAAGCTAATGATATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGGTGGCGGAGAAAACGGGTTGGTTTACGAAGTTCTCCACAAGAAATAGATTCAAAAGAAGAAAGTGATGATGAAGATTTTCTCAAGGTGTTCAGGCAAGAGAAAGTACATGCAGCAATTCAAAAGGCTTTGGCACGGGTGATTTCCATGGTCCCTTCTGTGCATGCTCGTCATCAGTATAATCGCATGCTTGGGATGCGTCGTCGAGCCGAGGCTGAACATGGCAACACGAGTGATGAAATGGAAACACAGTTATCAACTTCTGCGGATGATGCTTGGAATATTGATGATGATTTATATCAATTTCCTTGGGAAGCGCTCTAG 2850 0.4232 MLPGLQYNINDLFQEAKKRWLKPIEVLYILQNHDTCKFTDFPLNQPRGGSLYLFNRRVMRFFRKDGHNWRKKKDGRTVSEAHERLKVGNVEALNCYYAHGQENRSFQRRSYWMLNSEYEHVVLVHYRETNEGTSNSGCVTQSSPFSQSRSSYTTPNPETTSIVGDSCEPNQNFSSPGFLEVTSDIAIMNNGMDHLEKTNVQALRQLEEQLSLNEDSFTEIPPFYSEHEIPVAFAGLDDHKQPYDGTKDCSGNHYHELLDHDCPGGHEKTLSWTEMLGSSKSSFVNKLPEQHAYKAFENENPLSSLGRDMIANQETSYRIHPNRNNDENSYFLLPQDTGGVQFSPYSSIETQGTNSDYYETLFDQSQIQEPRDAYSSLTVGQKQKFTITAVSPEYCYANEATKVIIVGSFLCLPSDSTWACMFGDVEVPAEIIQDGVISCEAPSHLLGKVALCITSGNKEPCSEIKEFEFRNKTNSCIHCNVLETEVAHSPEELLLLVRFAEMLLSASTIKDDSSESGSQFSTEQKADDDSWSHIIDALLVGNVTSSGTIDWLLQELLKDKLQHWLSCRSNERDEDAGCSLSKKEQGIIHIISGLGFEWALNPILSCGMNVNFRDINGWTALHWAARFGREKMVASLIAAGASAGAVTDPSSQDPNGKTAASIAAINSHKGLAGYLAEVDLTSHLSSLTLEKCEVPKDSSELEAELTVSSVSKKNLEASDDEDSLKNTLGAVRNAAQAAARIQAAFRAHSFRKRMEREAASTTCLNGYVTGIGSIGGYVRSSRDYNSAALSIQKKYRGWKVRKEYLAFRQKVVTIQAHVRGYQTRKQYKLMIWAVGILDKVVLRWRRKRVGLRSSPQEIDSKEESDDEDFLKVFRQEKVHAAIQKALARVISMVPSVHARHQYNRMLGMRRRAEAEHGNTSDEMETQLSTSADDAWNIDDDLYQFPWEAL 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g06201 949 FunFam Calmodulin-binding transcription activator 4 isoform A 496 681 - -
Mepo3g06201 949 ProSiteProfiles IQ motif profile. 734 762 IPR000048 GO:0005515
Mepo3g06201 949 ProSiteProfiles IQ motif profile. 784 813 IPR000048 GO:0005515
Mepo3g06201 949 CDD IPT 386 470 - -
Mepo3g06201 949 Gene3D - 490 689 IPR036770 -
Mepo3g06201 949 SMART ANK_2a 655 684 IPR002110 GO:0005515
Mepo3g06201 949 SMART ANK_2a 616 645 IPR002110 GO:0005515
Mepo3g06201 949 Pfam IQ calmodulin-binding motif 786 804 IPR000048 GO:0005515
Mepo3g06201 949 Pfam IQ calmodulin-binding motif 809 828 IPR000048 GO:0005515
Mepo3g06201 949 Coils Coil 192 212 - -
Mepo3g06201 949 MobiDBLite consensus disorder prediction 133 167 - -
Mepo3g06201 949 ProSiteProfiles Ankyrin repeat region circular profile. 616 642 - -
Mepo3g06201 949 Gene3D Immunoglobulins 380 475 IPR013783 -
Mepo3g06201 949 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Mepo3g06201 949 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 734 835 IPR027417 -
Mepo3g06201 949 SUPERFAMILY Ankyrin repeat 585 677 IPR036770 -
Mepo3g06201 949 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Mepo3g06201 949 ProSiteProfiles Ankyrin repeat profile. 616 648 IPR002110 GO:0005515
Mepo3g06201 949 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 8 909 - -
Mepo3g06201 949 SMART iq_5 783 805 IPR000048 GO:0005515
Mepo3g06201 949 SMART iq_5 806 828 IPR000048 GO:0005515
Mepo3g06201 949 SMART iq_5 733 755 IPR000048 GO:0005515
Mepo3g06201 949 ProSiteProfiles IQ motif profile. 808 831 IPR000048 GO:0005515
Mepo3g06201 949 SMART CG_1_2 12 130 IPR005559 GO:0003677
Mepo3g06201 949 Pfam IPT/TIG domain 386 464 IPR002909 -
Mepo3g06201 949 Gene3D - 784 832 - -
Mepo3g06201 949 Pfam Ankyrin repeats (3 copies) 600 677 IPR002110 GO:0005515
Mepo3g06201 949 SUPERFAMILY E set domains 386 470 IPR014756 -
Mepo3g06201 949 FunFam Calmodulin-binding transcription activator 2 783 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g06201 Mepo-Chr3 76175473 76185034 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g06201 5 942 CAMTA Transcription Factor Family AT1G67310 48.592 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Mepo3g06201 CG-1 1.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g06201 K21596 - gmx:100791430 1229.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g06201 3 76175473 76185034 Mepo2g03878 2 48004064 48012812 PCT